Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0290 ATGGCGTTGACAACCATTCATCTTTCTTCTCGAATGTCTTTGTTAAACTCCAATCTCTCTTCTTCCAAATATCTATCAGACCTTCTTTCTTATTCTATTAATCCTCCATCCAAATCCATTATTCATCACCGATCATCATCCATAACCATGTCCACCATGATCACCCCAATTACCTCCCAAAACGGTTCTCCCCATTTTGGCAAGACAGATTCTTGCTTTGATGGTGAACGGGAAGGGAAAGATGCAGGTAGGAAAACTAAGATTGTGTGTACAATAGGTCCATCTACGAGCTCACGTGAAATGATTTGGAAATTGGCTGAAACTGGAATGAATGTGGCACGTTTAAATATGTCACACGGGGACCACTCTTCCCACCAGAAAACTATTGATATTGTCAAACAATATAATGCTCAATTTCCACACAAGGTTATATCTATCATGCTTGACACCAAGGGCCCCGAGGTCAGAAGTGGGGATGTACCCCAACCAATTTTACTTAAAGAAGGACAAGCATTCAATTTCACCATTAGGAGAGGTGTCTGCACAGAAGACACAGTTAGTGTCAATTATGATGATTTTGTGAATGATGTGGAGGTCGGAGACATACTACTCGTTGATGGTGGAATGATGTCACTTGCTGTTAAGTCAAAGACAAAAGACTTGGTTAACTGTGAAGTGATTGATGGTGGAGAACTGAAATCTAGGCGTCATTTAAATGTTCGTGGAAAAAGTGCAACTCTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTCGACAATCAAGTAGACTTCTATGCTGTCTCATTTGTTAAGGATGCTAGAGTGGTTCACGAGTTGAAAGACTACCTGAAAACTCACAATGCTGATATAAAAGTGATTGTAAAAATTGAAAGTGCGGATTCCATACAAAATCTTCAATCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGGGACCTTGGAGCTGAGCTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGTCGCAGTATGCAGAAGCCGGTTATTGTGGCAACAAATATGCTGGAAAGCATGATTGATCATCCTACACCAACAAGGGCAGAAGTCTCGGACATTGCAATTGCAGTAAGAGAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACATGGAAAATATCCATTGAAAGCTGTTAAGGTTATGCATACGGTGGCTCAAAGGACTGAAATCAGTATTCCAAGTTGTGATGCTTCTCCAAATCAATCCAGTTCCCATAAAAACCATATGGGAGATATGTTCGCTTTCCATGCAACTACTATGTCTAACACTCTCAATACTCCTATTATTGTTTTCACCCAAACAGGATCCATGGCCATTCATTTGAGCCATTATAGACCTTACTCAACAATCTTTGCATTCACAAATGAAGAAAGGATTAAGCAGAGGTTGGCACTTTATCATGGTGTTGTGCCCATATACGTGCAATTCTCAAATGATGCAGAGGAGACTTTTACTAGAGCCCTCCAACTACTATTGAGTGAGGGTCATTTACATGAGGGTCAGCATGTTACTCTTGTCCAAAGTGGAGCACAACGAATATGGCGTGCCGAATCCACCCATCATATCCAAGTTCGTAAGATTCATGAATAA 1668 0.4113 MALTTIHLSSRMSLLNSNLSSSKYLSDLLSYSINPPSKSIIHHRSSSITMSTMITPITSQNGSPHFGKTDSCFDGEREGKDAGRKTKIVCTIGPSTSSREMIWKLAETGMNVARLNMSHGDHSSHQKTIDIVKQYNAQFPHKVISIMLDTKGPEVRSGDVPQPILLKEGQAFNFTIRRGVCTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVNCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKTHNADIKVIVKIESADSIQNLQSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKYPLKAVKVMHTVAQRTEISIPSCDASPNQSSSHKNHMGDMFAFHATTMSNTLNTPIIVFTQTGSMAIHLSHYRPYSTIFAFTNEERIKQRLALYHGVVPIYVQFSNDAEETFTRALQLLLSEGHLHEGQHVTLVQSGAQRIWRAESTHHIQVRKIHE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0290 555 Gene3D - 415 534 IPR036918 -
Lal16g0290 555 SUPERFAMILY PK beta-barrel domain-like 153 244 IPR011037 -
Lal16g0290 555 Gene3D - 153 248 IPR015806 GO:0004743|GO:0006096
Lal16g0290 555 PANTHER PYRUVATE KINASE 37 554 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 142 158 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 266 280 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 296 322 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 323 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 373 391 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PRINTS Pyruvate kinase family signature 392 408 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 37 554 - -
Lal16g0290 555 Pfam Pyruvate kinase, alpha/beta domain 445 533 IPR015795 -
Lal16g0290 555 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 82 415 IPR015813 GO:0003824
Lal16g0290 555 ProSitePatterns Pyruvate kinase active site signature. 294 306 IPR018209 GO:0004743|GO:0006096
Lal16g0290 555 TIGRFAM pyruv_kin: pyruvate kinase 84 551 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal16g0290 555 Gene3D - 84 414 IPR040442 -
Lal16g0290 555 SUPERFAMILY PK C-terminal domain-like 402 553 IPR036918 -
Lal16g0290 555 Pfam Pyruvate kinase, barrel domain 84 421 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0290 Lal-Chr16 1715077 1725051 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0290 K00873 - gmx:100776984 815.453