Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0188 ATGATGGGAGGTCAATCCAGCAAGACCGCTAGTACTGATGTCCCGACACCAATGAAAATGGGTAACCATTCTCTGTATGCTTCTGATTTGAGCTCTTATGAAGCTGCATGTGTTGAAGATCCAAGCTTGCAATCCTTCGATGCTACCATTCAGGAACGCACAGGCAGGGTGATCACCTCGCTTGCTCATGGCGTTGAGGTTCGTTCATTGTCTATTGACTCATTGAAGGAAGTGACAGGCAGTATGCTTGAAATGAATCAGGAAGTTGTCAAAGTTATTCTCGAGTGCAAGCAAGATATATGGAACAAAAAGGACAAGGAGTTATTCTCCTTGGTGAACGATTTTTTTGAAAATAGTCTACATACATTAGACTTCTGTAATGCTCTTGAAAAATGCTTGAAACGAGCACGCGAAAAACAGGTTATAGTGAAGTCGGCAATTACTTATTTTGAGGAAGAGTCACAAAATGGGGTTGAAGGGGCGGTTTATCTGAAGACTTTGCAGGAGCTTAAGAGTTTCAAGGAAACTGAGGACCCGTTTACGGAAGAGTTTTATTCTCTGTTTCATTCAATTTATAAGCAGCAAGCATTGATGCTGAAGAAATTGCAAATTAAAAAGCAAAAGCTTGATAAGAAATTGAAATCCCTCAAGACGTTGAGGAGGGTGTCTAATGTTATATTTGTGGCTGCTTTTGTTTCGGTGCTGATTTTCTCAGTGGTAGCAGCTGCTCTTGCTGCGCCGCCTGTCGTGACAGCTTTGGCTGGTGCATTTTCTGTTCCACTAGGCTCTGTTGGAAAATGGTGCAACTCACTATTTACGAAATATGAGACAGCTTTAAAGGGTCAACAAGAAATAATCAGCTCAATGCAAATTGGTACTTACATTACATTGACAGACTTGGACAACATTCGAGTGAGTATAGATAAATTGGAAATAGAGTTTGAGTCCTTGTTGCAGAATGCTGAGTTTGCTCTTAGAAATGAGGATGCTGTAAGGCTTGCAGTCGATGAAATTAAGAAGAAAATCGAAACTTTTGCGGAGATCATTGAGAGTTTAAGTGAGCAGGCTGACAAATGTAGTCGGCAGATAAGGAGAGCAAGGACAGTGGTTCTACAAAAGATTATTAAATATCCCGATTGA 1140 0.4079 MMGGQSSKTASTDVPTPMKMGNHSLYASDLSSYEAACVEDPSLQSFDATIQERTGRVITSLAHGVEVRSLSIDSLKEVTGSMLEMNQEVVKVILECKQDIWNKKDKELFSLVNDFFENSLHTLDFCNALEKCLKRAREKQVIVKSAITYFEEESQNGVEGAVYLKTLQELKSFKETEDPFTEEFYSLFHSIYKQQALMLKKLQIKKQKLDKKLKSLKTLRRVSNVIFVAAFVSVLIFSVVAAALAAPPVVTALAGAFSVPLGSVGKWCNSLFTKYETALKGQQEIISSMQIGTYITLTDLDNIRVSIDKLEIEFESLLQNAEFALRNEDAVRLAVDEIKKKIETFAEIIESLSEQADKCSRQIRRARTVVLQKIIKYPD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0188 379 Pfam Protein of unknown function (DUF677) 43 374 IPR007749 -
Lal16g0188 379 PANTHER UPF0496 PROTEIN 3-RELATED 2 376 IPR007749 -
Lal16g0188 379 Coils Coil 335 369 - -
Lal16g0188 379 Coils Coil 300 327 - -
Lal16g0188 379 PANTHER UPF0496 PLANT-LIKE PROTEIN 2 376 - -
Lal16g0188 379 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0188 Lal-Chr16 1131115 1132254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0188 - - lang:109331619 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0188 16 1131115 1132254 Lal23g1385 23 14498889 14500028 LSH