Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0134 ATGGCTTCTCAAAATGCAGATACCAGAATTTCACTTTACCCACAAGTTATCGATTCCAACCCTAACCCACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAATCTCGATCCTCTCTTTACCCTTCCATCGACCTCAACGATCTCCACCATCACGACCTCTTTCCTCCAACCGACCATGATCGTCACTCTCCGCCGTCAGCTCCTCCCTCCGCAACCCAAGACATCCTCCTCAATATCCCCGGCGCCATTCTCAATCTCATCGATCAGCAATACAGCGTCGAACTCGCTTCTGGTAACTTCTCCGTTATCCGCCTCCGTCAAGGCGATAACGCCGTCGCTGTCTACGCCTGCGTCGCTGACGAGATTCAATGGCCTTTAGCCAATGATATGACCGCCGTCAAAGTCGATGACTCACACTACTTCTTCTCCTTCCGTGTCCCCAACGATTCCGCCGACGATAACGATTCCACCGAGTTCTTGAGCTATGGGTTGACTATAGCATCCAAGGGACAAGAAAATTTGTTGAAGGAGTTGGATTCGGTTTTGGATAGTTGCTGCAATTTCTCAGTACATAGGGTTTCGGAGAAGGCGAAGATGAAGGGAGAGGTTCTGGATGATTCAATGGCGAAGGAGTTTTCAGCGAAGGAGTTGGAATGTTCAGCGGAGAAGAAGGAATTGATGGAGGGACAATGCGCTGCGTATTGGACAACATTGGCTCCGAATGTGGAAGATTATAGTGGAAGCGCAGCAAGGTTGATTGCGAATGGATCTGGGAAAGTGATTAAAGGGATATTATGGTGTGGTGATGTGACTATGGAGAGGTTGAATTGGGGGAATAAGGTTTTGAAGAAGAGGATGAGTTCTGGTGAACAAGCTCAGATTAATCCTAAAACCTTGAAGCGGATTAAAAGGGTTAAGAGAGTTACTAAAATGACAGAGAAAGTAGCAAACGGGGTCCTTTCTGGGGTCGTTTCAGTCTCTGGATTTTTCACCAGTACAGTGGTAAACTCAAAAGCTGGAAAGAAGTTTTTCAGCCTTCTACCTGGGGAAGTTATGCTTGCATCTTTGGATGGATTCATTTTAAGATCATCTGTCCATGGTTATGTTGGTAAAGTGTGTGATGCTCTTGAAGTCACTGGAAAAAATGTCATGTCAACATCATCCACTGTGACAACCGAGCTTGTCAATCACAGGTATGGAGAACAAGCTGCTGAGGCAACAAGTGAAGGGCTTAGTGCTGCTGGCCATGCTTTTGGTACTGCATGGGCTGCTGTTAAGATTAGGAAGGCTATTAACCCAAAGAGTGTTTTCAAGCCTACCACACTGGTCAAATCTGGTGCTAAAGCTGCAGCTTCTGAACTTAAGGCTGGAAGGACCAAGTGA 1386 0.4632 MASQNADTRISLYPQVIDSNPNPLSSSSSSSSSSQSRSSLYPSIDLNDLHHHDLFPPTDHDRHSPPSAPPSATQDILLNIPGAILNLIDQQYSVELASGNFSVIRLRQGDNAVAVYACVADEIQWPLANDMTAVKVDDSHYFFSFRVPNDSADDNDSTEFLSYGLTIASKGQENLLKELDSVLDSCCNFSVHRVSEKAKMKGEVLDDSMAKEFSAKELECSAEKKELMEGQCAAYWTTLAPNVEDYSGSAARLIANGSGKVIKGILWCGDVTMERLNWGNKVLKKRMSSGEQAQINPKTLKRIKRVKRVTKMTEKVANGVLSGVVSVSGFFTSTVVNSKAGKKFFSLLPGEVMLASLDGFILRSSVHGYVGKVCDALEVTGKNVMSTSSTVTTELVNHRYGEQAAEATSEGLSAAGHAFGTAWAAVKIRKAINPKSVFKPTTLVKSGAKAAASELKAGRTK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0134 461 MobiDBLite consensus disorder prediction 1 43 - -
Lal16g0134 461 PANTHER SPARTIN 158 461 IPR045036 -
Lal16g0134 461 PANTHER SPARTIN 1 156 IPR045036 -
Lal16g0134 461 MobiDBLite consensus disorder prediction 1 73 - -
Lal16g0134 461 Pfam Senescence domain 253 449 IPR009686 -
Lal16g0134 461 MobiDBLite consensus disorder prediction 46 60 - -
Lal16g0134 461 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 156 - -
Lal16g0134 461 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 158 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0134 Lal-Chr16 795567 802480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0134 K19366 - gmx:100804971 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0134 16 795567 802480 Lal15g1519 15 17328597 17333587 LSH
Lal16g0134 16 795567 802480 Lal15g1519 15 17328597 17333587 PCT
Lal15g1519 15 17328597 17333587 Lal16g0134 16 795567 802480 PCT