Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0100 ATGAACAACTTCAAGTTAGGGGTAGATGTGGTTAGTGCTCACAACCTACTACCTAAAGATGGAGAAGGTTCATCAAGTTCCTTTGTGGAACTTTACTTTGATGGCCAGAAGTACCGTACCACTATTAAAGAAAAGGATCTCAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCTAATCTTCACTATCTCACTCTTGATGCTTATGTCCACTGCCATACCAGAGCTACTAACTCCAGTTCATTTCTTGGCAAAGTTAGCCTCACTGGGACTTCTTTTGTCCCTTACTGTGATGCTGTTGTGCTGCACTACCCATTAGAAAAGCGTGGTATTTTCTCCCGGGTGAGAGGAGAGATTGGCCTTAAAGTTTACATCACTGATGACTCAACCATAAAATCCTCAATTCCAGCCCCTGCTGTTCAGTCCATGCCAACAAATGACCCCAGCTTAGCACACATACAAGTTAATACAGCTGGAAATGCAATGGCAAACCCATTGTCGAATGCAAAGGTTGAGTCCGCAAGACACACATTTCATCATCTCCCTAACCAAACCCAGCACCAGCACCAACAACACTCCACTGGCTTTACAGATACCCACTATGTAACAAAGTATGAAGCTGATCAAATGGTATCTGGTGGACCACAACCTATGAAGCTAGTACACATGCATTCTCTTTCATCAGCGCAGCCGGTTGATTATGCACTTAAAGAAACAAGTCCGTTTCTTGGTGGTGGAAGAGTTGTAGGGGGTCGTATTATTCATAAAGACAAGGCCTCAAGTACATATGATCTTGTGGAAAGGATGTATTTCCTGTATGTCAGGGTTGTTAAAGCTCGTGAACTACCTGCTATGGATCTTACCGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGAAACTACAAAGGTATTACTCGACACTTTGATAAGAATCAGCATCCGGAGTGGAATCAAGTGTTTGCATTTTCAAAGGAGAGGATGCAAGCATCTATACTAGAAGTTAGGATCAAGGACAAGGATCTTGTCAAAGATGACTTTGTAGGCCTTGTAAGGTTTGACATCAATGAAGTTCCTTTGAGAGTACCACCAGATAGTCCTTTAGCGCCAGAGTGGTACCGGCTCGAGGATAAGAAAGGCGAGAAGATTAAAGGTGAGGTGATGCTTGCTGTATGGATTGGTACACAGGCAGATGAGGCATTTTCTGATGCGTGGCATTCAGATGCAGCTACACCTGTTGACAGCACACCTGCTGCAACCACAGTGATTCGTTCAAAGGTCTATCATGCACCAAGGTTGTGGTATGTGCGCGTTAACATTGTAGAGGCACAAGACTTGGTTCCTACGGATAGAAACCGTTTTCCTGATGTGTATGTGAAGGCGCAGATAGGGAACCAAGTGCTGAAAACAAAGACAGTTCCAGCCAGATCTCTTAGCCCTCTCTGGAATGAGGACCTTTTGTTTGTTGCTGCTGAACCTTTTGAAGACCATCTAGTCCTCTCAGTTGAAGATAGGATTGGTGCTGGAAAGGATGAGATCGTTGGGAGGGTCATCATACCACTCAACGCTGTGGAGAGGCGCGCTGATGACAGAATGATTCATTCTAGATGGTTCAACCTTGAAAAGCCGGTTGCTGTTGATGTTGATCAGTTGAAGAAAGATAAGTTCTCTAGCCGAATTCACCTACGGCTATGTCTTGATGGTGGATACCATGTTCTCGATGAATCAACTCATTACAGCAGCGATCTTCGTCCAACAGCAAAACAGCTATGGAGACCTCCAATTGGGATTCTAGAGCTTGGAGTCCTGAAAGCTGTAGGACTCCACCCTATGAAAACAAGGGAAGGAAGGGGCACTTCTGATACATACTGTGTAGCAAAATATGGTCATAAATGGATCAGAACAAGGACTATAGTTGATAATCTGTGTCCAAAATACAATGAGCAATACACTTGGGAAGTTTTTGATCAGGCCACTGTCCTAACAGTGGGTGTGTTTGACAACAGCCACATTGGAGAAAAGGGTTCAAAAGACCTGAAAATTGGCAAAGTTAGAATCCGCATCTCGACATTGGAAACAGAAAGGATTTACACTCACTCTTATCCATTGCTTGTTCTTCACCCAACCGGGGTTAAGAAGATGGGGGAACTTCACTTAGCAATAAGATTTTCATGCACTTCTTTTGCAAATATGCTTTACCTATACTCAAAACCACTGCTTCCAAAAATGCACTACATTCGGCCCTTCTCAGTGATGCAGCTTGACATGCTGCGACACCAAGCAGTGAACATAGTGGCCGCAAGACTAGGCCGAGCAGAGCCACCACTTCGGAAGGAAGTGGTGGAATACATGTCTGATGTGGACTCACACCTGTGGAGCATGCGGCGAAGCAAGGCGAATTTCTTCCGTCTGATGACAGTCTTTTCAGGCATATTTGCAGTTGGGAAGTGGTTTGGTGATATCTGCATGTGGAGGAATCCTATTACCACAGTGCTGGTTCATGTGTTATTCCTTATGCTAGTGTGCTTCCCTGAACTCATTCTACCTACAGTTTTTGTGTACATGTTTTTGATAGGTGTATGGAACTTCAGGTACCGACCCAGATACCCTCCTCACATGAACACAAGAATATCACAAGCTGATGCAGTGCAAGGAGATGAGTTGGATGAGGAGTTTGACACATTCCCTAGTACCCGAAACCCGGACATAGTTAGAATGAGGTATGATCGGTTAAGGAGTGTGTCTGGAAGAATTCAATCAGTGATTGGTGACTTGGCTAGCCAAGGGGAAAGGATTCAAGCACTGTTAAGTTGGAGAGACCCACGTGCTACAGCATTATTCATTACATTATGTCTTGTTTCTGCATTGTTTCTTTATGTTACTCCTTTTCAACCAATTGCAGGTTTCACAGGGTTCTATGTCATGAGGCATCCAAGGTTTCGACATAGGCTACCCTCTGCACCAATCAATTTCTTCCGTCGCCTCCCTTCCAAAACAGACAGTACTCACCCCTCATTTGAAATCCCAACTTCAATATCCAATAATAGTTCTATAACTCATCAAACTGAGGGTAATGCAACTCACCATGAAGACTTTCCAACTCCAAGTACCCCTTATATGGTTAATTACAATGATAAGAGGGATGAGGAGGTTGCATATGCAGTTAAGGCCATTGAGGAACAGTTGCAGGTCCATCGATCGTGGATATCAGACAAAAACTATGCATCTTGTGATGGTAGAGGAATCTATGTGTATGATTTGCCATCCATGTTTAACAAGGACTTGGTAGGTCAGTGCCGCGACATGATTCCATGGCAAGGTTTCTGTAAATATTTAAGTAATGAAGGGTTAGGTGATCCAATACCTAAGCTTGGTAAAGGATGGTATCAGACTCATCAGTACTCACTTGAACTCATATTTCATTCTAGGGTTTTGAAGCACCCATGTAGGGTTTATAATGAAAATGAAGCAAAGCTTTTCTATGTTCCAGCCTATGCAGGTTTGGATATCTTGAGATGGCATTTCAAGAATGTGTCAAATGATGTGAAGGACAGTTTGTCTTTGGAGTTAGTAAAGTGGCTTGAGAGACAAAACTCATGGAAAAGGAATGAAGGTAAGGATCATGTGTTTGTGTTAGGTAAAATTTCATGGGATTTTAGGAGGGCCAATACTGAATGGGGTTCTAGATTATTAGAGCTTGATAAAATGCAAAATCCCATTAAGCTTTTGATTGAAAGACAACCATGGCATTTGAACGACATTGGAATTCCTCATCCATCTTATTTCCATCCACATTCAGACAATGATATAATTGCATGGCAGATGAAAATCAGTATGTCGAATCGAAAGAACCTTGTCAGTTTCGCTGGAGCGGGGAGACCTGAAGCAAAGGACAACATAAGGTCAATATTGATAGACCAATGCACTTCAAAATATTATAGCAATGGTAAGTGCCAATTTCTGGATTGTGGTTCTGCCAAGTGTGATGGGCCTGAGTCAATTATACAAGTTTTTGCTGAGTCTGAATTCTGCATGCAGCCCCCAGGAGATAGTCCTACAAGGAAATCTGTATTTGATTCCCTTATATCAGGTTGCATACCAGTACTTTTTGATCCTTTCACAGCTTATTACCAATATCCTTGGCATTTACCTGAGGATCATCACAAGTACTCAGTGTTTATAGACAAAAAAGAAGTGCAACAAATGAATGTGAATGTGGTGGAGAGGCTAACAAATATTTCTTCAAGAGAGAGGGAAAAGATGAGGAGGTTTATTGTGTATGAACTATTGCCTGGATTAGTGTATGCGGATTATAATGCTGAGCTGAACAAATTTCAGGATGCATTTCATATTACAATCAATAATTTGCTTGAGAGGGTTAGCAGATTAGAAAAAACAGACAAGGATTGA 4422 0.424 MNNFKLGVDVVSAHNLLPKDGEGSSSSFVELYFDGQKYRTTIKEKDLNPVWNESFYFNISDPSNLHYLTLDAYVHCHTRATNSSSFLGKVSLTGTSFVPYCDAVVLHYPLEKRGIFSRVRGEIGLKVYITDDSTIKSSIPAPAVQSMPTNDPSLAHIQVNTAGNAMANPLSNAKVESARHTFHHLPNQTQHQHQQHSTGFTDTHYVTKYEADQMVSGGPQPMKLVHMHSLSSAQPVDYALKETSPFLGGGRVVGGRIIHKDKASSTYDLVERMYFLYVRVVKARELPAMDLTGSLDPFVEVRIGNYKGITRHFDKNQHPEWNQVFAFSKERMQASILEVRIKDKDLVKDDFVGLVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGEVMLAVWIGTQADEAFSDAWHSDAATPVDSTPAATTVIRSKVYHAPRLWYVRVNIVEAQDLVPTDRNRFPDVYVKAQIGNQVLKTKTVPARSLSPLWNEDLLFVAAEPFEDHLVLSVEDRIGAGKDEIVGRVIIPLNAVERRADDRMIHSRWFNLEKPVAVDVDQLKKDKFSSRIHLRLCLDGGYHVLDESTHYSSDLRPTAKQLWRPPIGILELGVLKAVGLHPMKTREGRGTSDTYCVAKYGHKWIRTRTIVDNLCPKYNEQYTWEVFDQATVLTVGVFDNSHIGEKGSKDLKIGKVRIRISTLETERIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSKPLLPKMHYIRPFSVMQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGIFAVGKWFGDICMWRNPITTVLVHVLFLMLVCFPELILPTVFVYMFLIGVWNFRYRPRYPPHMNTRISQADAVQGDELDEEFDTFPSTRNPDIVRMRYDRLRSVSGRIQSVIGDLASQGERIQALLSWRDPRATALFITLCLVSALFLYVTPFQPIAGFTGFYVMRHPRFRHRLPSAPINFFRRLPSKTDSTHPSFEIPTSISNNSSITHQTEGNATHHEDFPTPSTPYMVNYNDKRDEEVAYAVKAIEEQLQVHRSWISDKNYASCDGRGIYVYDLPSMFNKDLVGQCRDMIPWQGFCKYLSNEGLGDPIPKLGKGWYQTHQYSLELIFHSRVLKHPCRVYNENEAKLFYVPAYAGLDILRWHFKNVSNDVKDSLSLELVKWLERQNSWKRNEGKDHVFVLGKISWDFRRANTEWGSRLLELDKMQNPIKLLIERQPWHLNDIGIPHPSYFHPHSDNDIIAWQMKISMSNRKNLVSFAGAGRPEAKDNIRSILIDQCTSKYYSNGKCQFLDCGSAKCDGPESIIQVFAESEFCMQPPGDSPTRKSVFDSLISGCIPVLFDPFTAYYQYPWHLPEDHHKYSVFIDKKEVQQMNVNVVERLTNISSREREKMRRFIVYELLPGLVYADYNAELNKFQDAFHITINNLLERVSRLEKTDKD 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0100 1473 CDD C2A_MCTP_PRT_plant 5 131 - -
Lal16g0100 1473 Pfam Exostosin family 1080 1413 IPR040911 -
Lal16g0100 1473 Pfam Plant phosphoribosyltransferase C-terminal 852 1005 IPR013583 -
Lal16g0100 1473 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 600 739 IPR035892 -
Lal16g0100 1473 ProSiteProfiles C2 domain profile. 257 377 IPR000008 -
Lal16g0100 1473 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 438 591 IPR035892 -
Lal16g0100 1473 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Lal16g0100 1473 ProSiteProfiles C2 domain profile. 421 542 IPR000008 -
Lal16g0100 1473 Gene3D C2 domain 1 130 IPR035892 -
Lal16g0100 1473 ProSiteProfiles C2 domain profile. 583 705 IPR000008 -
Lal16g0100 1473 MobiDBLite consensus disorder prediction 1004 1038 - -
Lal16g0100 1473 CDD C2D_MCTP_PRT_plant 601 724 - -
Lal16g0100 1473 Gene3D C2 domain 597 731 IPR035892 -
Lal16g0100 1473 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 138 IPR035892 -
Lal16g0100 1473 Gene3D C2 domain 257 397 IPR035892 -
Lal16g0100 1473 Gene3D C2 domain 421 570 IPR035892 -
Lal16g0100 1473 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1005 - -
Lal16g0100 1473 CDD C2B_MCTP_PRT_plant 275 399 - -
Lal16g0100 1473 Pfam C2 domain 438 544 IPR000008 -
Lal16g0100 1473 Pfam C2 domain 276 369 IPR000008 -
Lal16g0100 1473 Pfam C2 domain 600 707 IPR000008 -
Lal16g0100 1473 Pfam C2 domain 5 93 IPR000008 -
Lal16g0100 1473 CDD C2C_MCTP_PRT_plant 439 589 - -
Lal16g0100 1473 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1005 - -
Lal16g0100 1473 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 274 413 IPR035892 -
Lal16g0100 1473 SMART C2_3c 439 537 IPR000008 -
Lal16g0100 1473 SMART C2_3c 601 704 IPR000008 -
Lal16g0100 1473 SMART C2_3c 275 371 IPR000008 -
Lal16g0100 1473 SMART C2_3c 5 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0100 Lal-Chr16 577185 583142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0100 179 1005 Lipid Metabolism Gene Families AT4G11610 77.699 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0100 - - gmx:100777951 1802.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0100 16 577185 583142 Lal16g0100 16 577185 583142 ECH