Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1538 ATGAATCACATCTTCAAGACCATGCAAAGGACTCATTTTCTAAGGCATTATTATAGAGTAACTAAGATTTGTTCAGTTCATGATTCAGGTAAGTTAAGTAACTCTGTGAAACAGGATCGTGATCCTGATGAAGGGTCATGGGAATCAATGGAAGGTTTGCTACGTTGTTCAGCAAATTTCATTCCTTTGTCTCCTATAAGCTTCTTGGAAAGAGCAGCAAAAATTTGTAAAGATAGAACATCATTGGTGTATGGTTCTTTGAAGTATAATTGGGGTCAAACCCATCATAGGTGTTTGAAACTTGCTTCTGCTCTTGCCCAATTGGGTATTTCCCGTGGAGATGTGGTTGCCACCCTATCACCTAATGTTCCTGCAATGTATGAGTTGCATTTTGCAGTACCAATGGCCGGAGGCATTCTCTGTACCCTTAATTCACGCTTGGATGCAGCTATGGTTTCAGTCTTACTAGAACATTCACAAGCGAAGATCCTTTTTGTCGACTACAAGCTAGTTGAACTTGCGCGGGGAGCGCTCGATCTGCTATGCAAAAGAACAAGAAAATTTCCAACTTTAGTTTTAATTACTGACTGTGTTGGCCCCTCTACAATCAACACCATTTCAAGCGATTATGAGTATGAGAGCCTGCTAGAAGCTGGGAATGATGAATATGATATAGTCAGACCAAAAAGTGAATGGGATCCTATAAGTATAAATTACACCTCTGGCACAACATCAAGGCCTAAAGGAGTTGTCTACAGCCATAGGGGTGCTTACCTGAACTCTCTTGCAACAGTTCTACTCTTCCGGATGGACATGTTTCCGGTTTATCTCTGGACTGTTCCGATGTTCCATTGCAATGGGTGGTGCCTCCCTTGGGGAGTGGCAGCACAGTGTGGGATCAATGTTTGTCTTAGGAAAGTTGCTCCAAAGGACATATTTGACAATGTGAGTCAGCATAAGGTGACACATATGGGAGGAGCTCCTACTGTGCTGAACATGATTGTGAACTCTGCTTCAATCGACAGAAAGCCACTCGATCACAAGGTGGTAGTGATGACAGGAGGTTCTCCTCCGCCCCCGCAAATCCTTTACAAGATGGAGGAGATTGGTTTTAGCATTTCTCACCTGTATGGTCTCACGGAAACATATGGTCCCGGGACTTCTTGTGCATGGAGACCCGAGTGGGATTCGATGCCTCTGAAAGAAAGATCACAGTTGAAATCCAGGCAAGGGGTTCCTCATGTGGGTTTGGAGGAAATCGCCATCAAAGATCCCGCCACAATGGAAAATGTTCCTGCTGATGGCAAAACAATGGGTGAGATAATGTTCAGAGGGAATACAGTGATGAGTGGATATTTTAGAGATTTGAAGGCAACAGAAGAAGCCTTCAAAGATGGGTGGTTTCATAGTGGGGATCTAGCTGTGAAACACCTTGATGGTTACATAGAAATCAAAGACAGATTGAAGGACATAATTGTCTCAGGGGGAGAGAACATTAGCTCAGTTGAGGTAGAGACAGTTTTGTATAGCCATCCAGCTATTCTTGAAGCCGCGGTCGTTGCCCGACCTGACAATCATTGGGGCCAAACTCCTTGTGCATTTCTGAAGTTGAAAGAAGGTTTTGATGTTGATGCTCAAGAAATAATCAACTTCTGCAGGAACCATTTGCCACATTTCATGGCTCCTAAAACAGTCATTTTTCAGGATATACCAAAAACTTCAACAGGGAAGATACAAAAGTATGTTCTTAGGGAGAAAGCCAAGGCCTTGGGCAGCATTTATTGA 1785 0.4331 MNHIFKTMQRTHFLRHYYRVTKICSVHDSGKLSNSVKQDRDPDEGSWESMEGLLRCSANFIPLSPISFLERAAKICKDRTSLVYGSLKYNWGQTHHRCLKLASALAQLGISRGDVVATLSPNVPAMYELHFAVPMAGGILCTLNSRLDAAMVSVLLEHSQAKILFVDYKLVELARGALDLLCKRTRKFPTLVLITDCVGPSTINTISSDYEYESLLEAGNDEYDIVRPKSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFRMDMFPVYLWTVPMFHCNGWCLPWGVAAQCGINVCLRKVAPKDIFDNVSQHKVTHMGGAPTVLNMIVNSASIDRKPLDHKVVVMTGGSPPPPQILYKMEEIGFSISHLYGLTETYGPGTSCAWRPEWDSMPLKERSQLKSRQGVPHVGLEEIAIKDPATMENVPADGKTMGEIMFRGNTVMSGYFRDLKATEEAFKDGWFHSGDLAVKHLDGYIEIKDRLKDIIVSGGENISSVEVETVLYSHPAILEAAVVARPDNHWGQTPCAFLKLKEGFDVDAQEIINFCRNHLPHFMAPKTVIFQDIPKTSTGKIQKYVLREKAKALGSIY 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1538 594 CDD ttLC_FACS_AEE21_like 60 585 - -
Lal15g1538 594 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 31 593 - -
Lal15g1538 594 Pfam AMP-binding enzyme C-terminal domain 503 577 IPR025110 -
Lal15g1538 594 Pfam AMP-binding enzyme 70 494 IPR000873 -
Lal15g1538 594 ProSitePatterns Putative AMP-binding domain signature. 237 248 IPR020845 -
Lal15g1538 594 SUPERFAMILY Acetyl-CoA synthetase-like 52 588 - -
Lal15g1538 594 Gene3D - 55 488 IPR042099 -
Lal15g1538 594 Gene3D - 489 590 IPR045851 -
Lal15g1538 594 PANTHER ACYL-ACTIVATING ENZYME 31 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1538 Lal-Chr15 17455564 17459055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1538 126 593 Miscellaneous Gene Families AT1G20560 61.489 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1538 - - gmx:100500429 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1538 15 17455564 17459055 Lal15g1538 15 17455564 17459055 ECH