Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1523 ATGTCAAAGCGAAACTCTGTCGTTTTATTATCATCGGACGATGAAGATGGTTCAATTAATCGTTCAAATCATGGCTATAAAACAAAGCCAAAGTCTAAGAAATCAACAAGCTCACGAGGACTAAAGAAGCCTCGAGTTTCTACTTCAGAGACTCGTTTCTCTAATCTGCATCAGATCAACTTACTCGATGAAGACTTTAACGAAGTGTTTACTGGGTCAAAGGTATCCGCTGATACTCAAAGAAGCAGTACATTGGAGCAATGGGTTGCTAAATACAAGCCATGTTCATTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTCAAGGTTGAAGAAGTCAAGACATGGTTCGAGGAAAGGTTGAAAGCTTCAAAGACTTGCAAAACAATGTCTAGACAGAGATGGAGTATTAAGGATAAGGGTATCTACAGAAATAATGTTCTTGTCATTAGTGGGCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCTTCTCACCTGGGAGCGACAGTGTGTGGATGGAATACACCTACACCTGTAATTTGGCAAGAACATCTTTATAATTCCGGTGCAGGGGCACAATACACATCCAAGTTGGGTGAGTTTGAAAATTTTGTTGAGAAGATACGGAAATATGGAATAATTCCAACTTCCTTTACTGGAGAGTCAAAGCCAAGTGTCATACTTTTAATAGACGATCTTCCTATGACAAATGGGAAAGCTGCTTTTGGAAGACTTAAAGATTGCTTGCACCTTTTGGTGTACTCAACTCAGATACCCACAGCAATATTGTTCACTGACTATGGCAATACTGATTCAGCAGATTATAATGCTAGGTGCTTGGAAGAACTTCAGCTGTCTCTTGAGAGTTCTGGGGCTTGTAAGGTTGCATTCAATCCAATTACAACGAATTCTATTAAGAAGACACTTTTTAGAATATGCCAAATGGAGCATTGTGATGTGTCTGCTGACCATGTTGACCATATAGCAAAAGCAAGTGGAGGTGACATTAGACATGCAATTACTTCCTTACAGTTTTTCTGTTTGAAACCAAATCAAGTGCATTCTTTGTCTCTATTTACCGACTCTCCTGGTGCTTTAAAAGACGAATGTAATAAGCCTGTTAGATCGAATAATGGATATTACTTGCACTATGGAAGAGATGAGACACTTTCTTTATTTCATGCATTGGGGAAATTTTTGCACAATAAAAGAGAGACCCGGTCCTCAATTAAATATGACCAAGATGACTTTCTTATACAAGAAAGGTTTTCAAGATTGCCTTTAAAAATGGATGTGCCAGAGAAGATTCTTTGTCAATCCCATGCGCAACCTGGTCTTGTTACTGGTTTTCTGCATGAAAATGTTCTAGATTTTTTGGATGATGAGGCAATAGATGATGCATGGACATTGTCTTCATATCTAGGTGATGCTGACATTCTTCTCGCTAATCTTCGGGGAACGCTACCTAGTGATAATGACGCTGGGAGTGTTCTGCAGTCTGCTGCTGCTTCAGTTGCTGTTCGTGGGGTGCTATTTGGAAATTCTCAACCACTATCTTCCAGGTGGCATACAATTCGCCGACCACAGCTCTGGCATGTGGAGAAAGCATCCTTATACAAGAAGAATGAAATGTTGAGGTTGAAATTCCCTGCTTGTAAGTGCTTGAGTTCTTATCACATGTCAGTTATGGCCACAGAGTACATGCCTATATATAAGTTGCTTGGGAATAGGGCATATGGTGTATATAATGAGCCTCATGAGGAAGTGTTGAAGAACATGGATATGGAAGATGTTGATTTTGACCAAATGAGTTTAGATGAACAAGTGAGGGATTCTGATGATGACATAGAAGATTGGTAG 1866 0.3976 MSKRNSVVLLSSDDEDGSINRSNHGYKTKPKSKKSTSSRGLKKPRVSTSETRFSNLHQINLLDEDFNEVFTGSKVSADTQRSSTLEQWVAKYKPCSLEELAVHKKKVKVEEVKTWFEERLKASKTCKTMSRQRWSIKDKGIYRNNVLVISGQAGVGKSAAIHVIASHLGATVCGWNTPTPVIWQEHLYNSGAGAQYTSKLGEFENFVEKIRKYGIIPTSFTGESKPSVILLIDDLPMTNGKAAFGRLKDCLHLLVYSTQIPTAILFTDYGNTDSADYNARCLEELQLSLESSGACKVAFNPITTNSIKKTLFRICQMEHCDVSADHVDHIAKASGGDIRHAITSLQFFCLKPNQVHSLSLFTDSPGALKDECNKPVRSNNGYYLHYGRDETLSLFHALGKFLHNKRETRSSIKYDQDDFLIQERFSRLPLKMDVPEKILCQSHAQPGLVTGFLHENVLDFLDDEAIDDAWTLSSYLGDADILLANLRGTLPSDNDAGSVLQSAAASVAVRGVLFGNSQPLSSRWHTIRRPQLWHVEKASLYKKNEMLRLKFPACKCLSSYHMSVMATEYMPIYKLLGNRAYGVYNEPHEEVLKNMDMEDVDFDQMSLDEQVRDSDDDIEDW 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1523 621 Gene3D - 303 367 - -
Lal15g1523 621 Pfam Rad17 P-loop domain 83 276 - -
Lal15g1523 621 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 33 621 - -
Lal15g1523 621 CDD HLD_clamp_RFC 302 347 - -
Lal15g1523 621 MobiDBLite consensus disorder prediction 1 16 - -
Lal15g1523 621 Gene3D - 86 284 IPR027417 -
Lal15g1523 621 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 33 621 IPR004582 GO:0006281
Lal15g1523 621 MobiDBLite consensus disorder prediction 1 49 - -
Lal15g1523 621 MobiDBLite consensus disorder prediction 26 40 - -
Lal15g1523 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 350 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1523 K06662 - gmx:100799826 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1523 15 17355859 17362167 Lal15g1523 15 17355859 17362167 ECH