Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1521 ATGATGCAAGATATGTGGAATGGTGCACCAGGTTCAAGAGCATCAAAATCTGCACCTTGCTCTCCAGCAAAACCCGTTGGTGTTCTTAGATCACGCTCTGAATCGTTTCATATGACCCATAAGGTTCCAATTGGTGACACTCCTTATGTCAGAGCAAAAAATGTTCAGTTGGTGGATAAGGATCCAGAGAGAGCAATTCCATTGTTTTGGGCAGCAATTAATGCAGGAGATAGAGTTGATAGTGCTTTGAAAGATATGGCTATTGTGATGAAGCAACAAAATCGATCTGAAGAAGCCATTGAAGCTATTAAGTCTCTTCGAAGTAGATGTTCAGATCAAGCACAAGAATCTCTTGATAATATCCTCTTGGATCTTTATAAGAGGTGTGGGAGACTTGATGATCAAATTGGTCTATTGAAGCATAAACTGTTTTTAATTCAAAAAGGATTAGCTTTCAATGGTAAGCGCACAAAAACTGCTAGATCTCAAGGCAAAAAGTTTCAAGTCTCTGTGGATCAAGAAGCCACAAGGTTACTGGGAAATTTAGGATGGGCTTTAATGCAGCAGAACAATTACATAGAAGCAGAAGATGCATATAGGCGTGCACTTTCAATAGCTCCAGATAACAACAAAATGTGCAACTTAGGAATATGTTTGATGAAACAAGGTAGAATTAGTGAAGCAAAAGAAACTTTATATAGAGTGAAACCACCAACTATTGTAGATGGTCCAAGAGGTTCAGAATCTCATATGAAAGCCTATGAAAGAGCACAACAAATGCTCAAAGACCTTGAATCTGAAATGATGAATAAAGGCTGTGATAGAATTGAACAAAGCAGAATCTTTGAAGCATTCCTTGGCTCTTCATCAATATGGCAACCTCAACCTTGTAAGGACAACAACAACAGCAACCAAGTCGGCGCTGCCGCGGCCTCGAATTCATTCAAAATCCAAGATGGGTTTGGAGATGAGAATAGTAATAATGCTAATATCATGAACATGATACCAAATCCAAATCAGACAGCACAAAAACAACTACAGTATAACAACAAAGTTGTTGTTGCAATGTTTGGTAACTCACTTAATGTTGCAGCTGCGCCATTCTATGCAACAAAACCACCTTTGAAGGAGTCATCAAATGAAGAGAATCAAATCTCAGAGAAGCTTAAGAGAACAAGATCTGGAAATGCTGCAGCATCTATGATGAAACTAGAGGTACCTGTGCCTGAAAACAAAACAAGAAGGCTTTCATTAGAGGAAGATATTGAAAGGAAAAAGTTGACAGATTTGTTGCCAGATAACAAAGACTTTGAAGATGCTATTCTTTCAGCAATTCTAGGACCAGGAAATGAGTCTGATAAAGCAAATGGCACAAGCATTTTCAACACCAAAACTGAAAAAAGGCTTAAGGTTTTTCAAGATATTACATTATCTATGAGTCCTAGGGCTTAA 1452 0.3815 MMQDMWNGAPGSRASKSAPCSPAKPVGVLRSRSESFHMTHKVPIGDTPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIGLLKHKLFLIQKGLAFNGKRTKTARSQGKKFQVSVDQEATRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRISEAKETLYRVKPPTIVDGPRGSESHMKAYERAQQMLKDLESEMMNKGCDRIEQSRIFEAFLGSSSIWQPQPCKDNNNSNQVGAAAASNSFKIQDGFGDENSNNANIMNMIPNPNQTAQKQLQYNNKVVVAMFGNSLNVAAAPFYATKPPLKESSNEENQISEKLKRTRSGNAAASMMKLEVPVPENKTRRLSLEEDIERKKLTDLLPDNKDFEDAILSAILGPGNESDKANGTSIFNTKTEKRLKVFQDITLSMSPRA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1521 483 Coils Coil 89 109 - -
Lal15g1521 483 Gene3D Tetratricopeptide repeat domain 55 236 IPR011990 GO:0005515
Lal15g1521 483 Coils Coil 247 274 - -
Lal15g1521 483 PANTHER PROTEIN POLLENLESS 3-LIKE 2 6 480 IPR044961 -
Lal15g1521 483 MobiDBLite consensus disorder prediction 1 26 - -
Lal15g1521 483 PANTHER PROTEIN POLLENLESS 3-LIKE 2 6 480 - -
Lal15g1521 483 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Lal15g1521 483 SMART tpr_5 176 209 IPR019734 GO:0005515
Lal15g1521 483 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Lal15g1521 483 SUPERFAMILY TPR-like 57 235 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1521 Lal-Chr15 17346693 17349515 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1521 - - gmx:100803414 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1521 15 17346693 17349515 Lal15g1521 15 17346693 17349515 ECH