Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1518 ATGGCACAACAGATAGTAAATATGGCTAGTAATCACGAAATTAATAAGCCGTTAATTCAAAGGAATTACCTCAACAACGACGGCGCCTCCGGTTCTCGCCGCAAATCTTCCTCACCGGAAAACTCGCCGCTAGGCGAAAATTCTCCAATCGAGCAAGTAGCACTCACTGTTCCGGTTACCGATGATCCTTCTTTACCTACCTTAACATTCAGGACATGGTTTCTTGGATCTCTAGCTTGCGTTCTTCTCTCCTTCCTCAACCAGTTTTTCGGTTACCGTCGAGAGCCGCTCTCCGTGACGGCGATATCGGCGCAGATCGCGGTCGTCCCGATCGGTCACCTGATGGCGTCAACGGTGACGAAGCGAGTTTTCTGGAAGGGGAAGAAATTCGAGTTCACGTTGAATCCAGGGAAGTTCAACGTGAAGGAGCATGTGCTTATCACGATTTTCGCTAATTCGGGAGCTGCTAGTGTTTATGCCGTTCATTTTGTTACCGGTGTGAAAGTGTTTTACCGGAAAGATATGTCGCTGGTGGTGGCGATGCTGGTGGTTGTGACGACGCAGGTGTTAGGTTTTGGTTGGGCTGGTGTTTTCCGTAGGTACCTTGTGGAACCTGCAGCCATGTGGTGGCCCCAAAATCTTGTGCAGGTATCGCTTTTCAGGGCACTTCACGAGAAAGAGCGTCGGCCAATTGGAGGGCTAACTCGAAATCAGTTCTTCCTCATGGCATTTGTTTGCAGCTTTGCCTATTATGTCTTTCCAGGCTACTTGTTTCCAATTTTAACATCACTTTCTTGGGTTTGCTGGATATATCCCACTTCTGTTATAGCACAGCAGTTAGGTTCAGGGATGCATGGCCTTGGAATCGGTGCTATTGGTCTTGACTGGTCTAGTATATGTGCTTATTTTGGTAGCCCTTTAGCAAGTCCTTGGTTTGCAACAGCTAATGTTGCTGTTGGTTTTTCCATTTTCATGTATATCATTACCCCTACTGCTTATTGGTTTAATCTCTACAATGCAAGACGATTTCCCATATATTCAGATGGTCTATTCCTTTCCAATGGCAACAAATACAACATCTCAGCCATTATAGATTCTGACTTTCACCTTAACACGGAAGCTTATGAACGTGAGGGCCCTCTTTATCTTAGTACCCTCTTTGCTATGTCATATGGCATTGGTTTTGCATGCCTTTCTGCTACTCTTGTTCATTTGAAGTATGTGTTTCATGGCCACAGTGAGATATTGCAGTTAAGTAAGTCTGCTTTCAAAGAAAAGAAGATAGATATACATACGAAGCTTATGAGGAAATCCTATAAAACAGTTCCTGGGTGGTGGTTTTTTTGTATTCTTTTCTTCAACATTACTGCAACTATATTTATATGCGAGTATTATAACGATCAACTCCAACTACCATGGTGGGGCGTGGTGTTAGCCTGTGCTATTGCCATATCATTCACCCTACCCGTTGGAATCATCAGAGCCACTACAAATCAGGCACCAGCTTTGAATGTGATAACAGAGTACATAATTGGATACATCTACCCGGGATATCCTATTGCTAACATGTTGTTTAAAGTGTATGGCAATGTGAGTATGAAGCAGGCAATTTTCTTTTTGCAAGATTTCAAACTTGGCCATTACATGAAGATTCCTCCAAGAGCAATGTTCGCTGCACAGGTGCTTGGCAGCATCATCGGCGCAGTGGTACATATTGTAACAGCATGGTGGCTCATGAACACTGTTCCAAATATATGCAACAGGGATTTGCTTCCAACTGGTAGCCCATGGACTTGTCCTGGTGACCATGTATTCTATGATGCATCAGTGATATGGGGTTTGATAGGGCCACGCAGAATATTTGGAGATCTTGGACACTACTCAGACATCAATTGGTTTTTTTTGGGTGGGGCTATTGCTCCTTTCTTAGTTTGGCTAGCACACAAGGCCTTCCCAGAAAAACAATGGATCAAACTTATCTCTCTGCCTGTGATGTTGGGTGCATTATCTGACATGCCACCAGCTACATCAGTAAACTACATCAGTTGGGTTATTGTTGGATTTGCCTCTGGGTTTATTGCATACCGTTACCATCGTGGTTGGTGGATCCGACACAATTATGTTTTATCTGGGGCACTTGATGCTGGATTAGCTTTCATGGGAGTTTTACTGTACTTATGTTTGGGCATGGAACATATCAACTTAAACTGGTGGGGTAGTAACTCAGATGGATGCCCACTAGCTTCATGTCCAACTGCTCCAGGTGTCCTAGCTAAAGGGTGTCCTCTTTACTGA 2295 0.4418 MAQQIVNMASNHEINKPLIQRNYLNNDGASGSRRKSSSPENSPLGENSPIEQVALTVPVTDDPSLPTLTFRTWFLGSLACVLLSFLNQFFGYRREPLSVTAISAQIAVVPIGHLMASTVTKRVFWKGKKFEFTLNPGKFNVKEHVLITIFANSGAASVYAVHFVTGVKVFYRKDMSLVVAMLVVVTTQVLGFGWAGVFRRYLVEPAAMWWPQNLVQVSLFRALHEKERRPIGGLTRNQFFLMAFVCSFAYYVFPGYLFPILTSLSWVCWIYPTSVIAQQLGSGMHGLGIGAIGLDWSSICAYFGSPLASPWFATANVAVGFSIFMYIITPTAYWFNLYNARRFPIYSDGLFLSNGNKYNISAIIDSDFHLNTEAYEREGPLYLSTLFAMSYGIGFACLSATLVHLKYVFHGHSEILQLSKSAFKEKKIDIHTKLMRKSYKTVPGWWFFCILFFNITATIFICEYYNDQLQLPWWGVVLACAIAISFTLPVGIIRATTNQAPALNVITEYIIGYIYPGYPIANMLFKVYGNVSMKQAIFFLQDFKLGHYMKIPPRAMFAAQVLGSIIGAVVHIVTAWWLMNTVPNICNRDLLPTGSPWTCPGDHVFYDASVIWGLIGPRRIFGDLGHYSDINWFFLGGAIAPFLVWLAHKAFPEKQWIKLISLPVMLGALSDMPPATSVNYISWVIVGFASGFIAYRYHRGWWIRHNYVLSGALDAGLAFMGVLLYLCLGMEHINLNWWGSNSDGCPLASCPTAPGVLAKGCPLY 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1518 764 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 53 729 IPR004813 GO:0035673
Lal15g1518 764 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 46 734 IPR004648 GO:0055085
Lal15g1518 764 MobiDBLite consensus disorder prediction 25 47 - -
Lal15g1518 764 Pfam OPT oligopeptide transporter protein 68 727 IPR004813 GO:0035673
Lal15g1518 764 PANTHER ISP4 LIKE PROTEIN 33 763 IPR004648 GO:0055085
Lal15g1518 764 PANTHER OLIGOPEPTIDE TRANSPORTER 7-LIKE 33 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1518 Lal-Chr15 17317322 17327299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1518 31 764 Organic Solute Cotransporters AT4G27730 60.109 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1518 - - gmx:100777917 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1518 15 17317322 17327299 Lal15g1518 15 17317322 17327299 ECH