LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal15g1484	ATGGACTTTGTTGCTTTACCTCCATGGATTCCAGAAGATGATCTTCTATTGAAGAACGCTGTTGAGGGTGGTGCTTCTTTGGAATCACTTGCTAAAGGAGCGGTTCGATTCTCTAGGAAGTATTCTTTTACTGAATTGCGGGATCGGTGGTATTCTCTTTTGTATGATCCTGTTGTTTCGGCCGAGGCTGCTGCGAAGATGGTGAGTTTGGAGTTAGCTGGAGGGTGTGGTGGTTCTTCACTCAAGCCTGGTGGAAGTGGAAGCAAGGATGTGTCTGGTGAAGGTGCCTCTTATAAGAGGGAAATCGAGAGCGTTCGAAGGCATTACAATGCCACGAAGAAAAGGTTTCGCAGGCAGGTATTTTTTGACACATTTGATAGGGCTTTGCAAGATGAAATGAATATTGAGAATGATTTTGTAAGTAATGAGGAGTGTCTTGGTAGAAAGTATTTGGAAGGGGGTGGTAAGGTGCGTAAACATGTTGGTGTTGAATTCGGTGGAACTGATAATGGGGTGTCTTTGGTGGAATGTAAGTTAAATAAGGATATGAATCATATGGATAATTTAATTGGTTACGAGAATTACTCGGGGTTAGAAGCAATAGGCCCGTCTCATTCAATAGGTGATGTTCCTTTATGGAAATCGATTGAGGATGTTACTGTGCCTGCTATGCCTGTCCAGATGACTGTTGAGAATAAAAATCACAGCACAGAGGAGAGAGTAACGCTTCCACATGATTTGAAAGGTGAAAGTGCCGATGAAGTTTTAAACGCTTCTGCTGCTAGGTTTGGAGAAGGTGTCAAACACCTTTCTGATTCACTCTTGAACTTGACAAGTGAGGATGAGCATATCTTGATGGATATAGATGTGAAAGGTGCAACAGATAAGCCTTGTTATGATAACGTGGATTCACTTCTGTTGAGTTCTCCCTTCGAAATTCAGGGAAATGATGCAACTGATATTCATGAACCTCAGAAAGATACAGAAACTAAGGGGTCATCGGCCTCTGAGTTGGAGGTTGTTGCAAACCCATTACGCTTTGAACATGGTGATCTGCGTTCTACTACTAACCCTGGATATGATACTCAATCATCTGTTGCAGCACAAAGTCCTCACTCTGAGCTTAGTGAGAAATTTGTGATCTGCCTATTTAACACTGAGGACCCAAATGTCCCATCCGATGATGGCACTGACTTTTCTGTTGTAGTTCCTTTTCCAGGGACTCTGAAATCACAACCAATTGATGAAGAGGTGGGTTGTAAAGATTTTTCCATTAATGATCAAAGAAAAAATGAACCTGTTAGAAGCTCAGAGATAGAAGATATTCCTTCACACACTTTTGCCACTTCGCAGGTAGTTAGACCAGCGTCAGTGCCTGAAAATCCTCGAAGGAGCTCTATTTCTGCAGTTTCTGGACAGAATAATGATCTCAACATCAACCCAAGTCAAAGCAGACCAGTTCATCCAACTATGATGCTTGGCTTGGATGGACGTCCAAAACAAAAGGAAATTGATGCTCTGGATTCAGCTAAAGTTTACGTACATCAAAAGGAAGGGGACCATAATAGTTTACCTAAATCAGAAGCAAAGCCCTTATCACTCGATCCGGAAGGAGATGACGATGATGACAATGACATTCCTTACTTTTCTGATGTTGAGACATTGATTCTCGAAATGGATTTATCTCCAAGTGATCAGGATACCAGTGCAAATATAGAAGTTTTAATATATCAACTTGAAGAAACTAAAAGGACCATCATGAGGTTGGAGCAATGCTTTCAGTCCTTTATGCATAGAGCCATCGCATCTCGGGGTGCAGTTGCAGTATTGTTTGGGCGCAAACTAAAGGAATATATTAAGAAAAGCGAGGTTGTTCTTGGCAGAGCAACAGTTGAGGTAAAAGTTGATATTGATTTGGGAAGAGAAGGGTGTGCTAACAAAATATCTAGACGACAAGCTTTAATAAAGATGGAACCAAATGGCTCTTTCATTATTAAAAATCTCGGCAAGGGTTCTATCTTCTTGAACGGCAAAGAAATCGCTTCAGGACAGATTCGGCTTCTTAGTGCTAGTAGTTTTATCCAGATTAGAGACATGTCATTCATATTCGAGAGCTATGATAAATGTGTGAGGAAGTTCTTAGAAAATGTGGATAAAGATAGATCGATATAA	2172	0.4102	MDFVALPPWIPEDDLLLKNAVEGGASLESLAKGAVRFSRKYSFTELRDRWYSLLYDPVVSAEAAAKMVSLELAGGCGGSSLKPGGSGSKDVSGEGASYKREIESVRRHYNATKKRFRRQVFFDTFDRALQDEMNIENDFVSNEECLGRKYLEGGGKVRKHVGVEFGGTDNGVSLVECKLNKDMNHMDNLIGYENYSGLEAIGPSHSIGDVPLWKSIEDVTVPAMPVQMTVENKNHSTEERVTLPHDLKGESADEVLNASAARFGEGVKHLSDSLLNLTSEDEHILMDIDVKGATDKPCYDNVDSLLLSSPFEIQGNDATDIHEPQKDTETKGSSASELEVVANPLRFEHGDLRSTTNPGYDTQSSVAAQSPHSELSEKFVICLFNTEDPNVPSDDGTDFSVVVPFPGTLKSQPIDEEVGCKDFSINDQRKNEPVRSSEIEDIPSHTFATSQVVRPASVPENPRRSSISAVSGQNNDLNINPSQSRPVHPTMMLGLDGRPKQKEIDALDSAKVYVHQKEGDHNSLPKSEAKPLSLDPEGDDDDDNDIPYFSDVETLILEMDLSPSDQDTSANIEVLIYQLEETKRTIMRLEQCFQSFMHRAIASRGAVAVLFGRKLKEYIKKSEVVLGRATVEVKVDIDLGREGCANKISRRQALIKMEPNGSFIIKNLGKGSIFLNGKEIASGQIRLLSASSFIQIRDMSFIFESYDKCVRKFLENVDKDRSI	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	315	337	-	-
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	424	439	-	-
	Lal15g1484	723	Pfam	N-terminal region of micro-spherule protein	9	71	IPR025999	-
	Lal15g1484	723	SMART	FHA_2	623	680	IPR000253	GO:0005515
	Lal15g1484	723	CDD	FHA	620	705	IPR000253	GO:0005515
	Lal15g1484	723	SUPERFAMILY	SMAD/FHA domain	617	709	IPR008984	GO:0005515
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	424	496	-	-
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	319	333	-	-
	Lal15g1484	723	Pfam	FHA domain	625	696	IPR000253	GO:0005515
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	516	544	-	-
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	349	371	-	-
	Lal15g1484	723	ProSiteProfiles	Forkhead-associated (FHA) domain profile.	624	680	IPR000253	GO:0005515
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	355	371	-	-
	Lal15g1484	723	PANTHER	MICROSPHERULE PROTEIN 1	5	721	IPR037912	GO:0002151\|GO:0031011\|GO:0071339
	Lal15g1484	723	MobiDBLite	consensus disorder prediction	442	487	-	-
	Lal15g1484	723	Gene3D	-	562	715	-	-
	Lal15g1484	723	PANTHER	FHA DOMAIN PROTEIN	5	721	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal15g1484	Lal-Chr15	17008363	17013325	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal15g1484	-		-	lang:109333160	1262.67

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal15g1484	15	17008363	17013325	Lal15g1484	15	17008363	17013325	ECH