Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1458 ATGGCAAGCATTGTTGTTACATGTAATTCAGGATCATTGCTTAGAAAAAGGGTCTCAGAAAACAATGGTGTATCTTTGGTTAAGCATGATGAACTTAGATTGGATCATAGAATGCAAATACCTTCAGCCACAAGCATGCTCACCAGGAACATTTCAGCTTCAGCCTCAAGAAGCAGAACAATCAAGGCCATGGCTTCTTCAACAGTTGCAGCTCCTAAGAGGGAAACAGATCCAAAAAAGAGAGTAGTAATAACAGGCATGGGTCTTGTTTCAGTCTTTGGCAGTGACATTGACACATTTTATAACAAACTTCTTGAGGGAGAAAGTGGGATAAGCCTAATAGATAGGTTTGATGCCTCAAACTTCTCGGTCCGTTTCGGCGGTCAGATTCGTGATTTCTCTTCAGCAGGCTATATTGATGGCAAGAATGATCGGCGCCTCGATGATTGCTGGAGGTATTGCATAGTTGCAGGAAAGAAGGCCCTTGATGATGCCAACCTTGGACATGAAGTCCTTCAAACTATGGACAGAACTAGAATAGGAGTTCTTGTCGGAACGGGAATGGGAGGTTTAACTGCTTTCAGCTCTGGTGTGGAGGCTCTTATGCAGAAGGGCTATAAGAAAATTACTCCATTTTTCATTCCATACTCTATAACCAACATGGGTTCTGCATTGTTAGCAATAGACACTGGCCTAATGGGTCCGAATTACTCGATTTCTACTGCTTGCGCAACGGCAAATTACTGCTTTTATGCGGCTGCAAATCACATTAGAAGAGGTGAAGCAGATATTATGGTAGTTGGTGGGACTGAGGCTGCAATAATACCTATTGGTGTTGGAGGCTTTATTGCATGCAGGGCTTTGTCACAGAGAAATGAAGACCCGAAAAAGGCTTCAAGACCATGGGACAAAGCCCGCGATGGTTTTGTCATCGGCGAAGGATCAGGCGTGCTGATAATGGAGACATTGGAGAGTGCAACAAAAAGGGGAGCTACTATATTAGCAGAATATTTAGGTGGTGCAGTAACATGTGATGCTCATCACATGACTGATCCAAGATCTGATGGACTTGGAGTTTCATCATGCATAATCAAGAGTTTAGAAAATGCTGGAGTTTCCCCTGAAGAGGTGAACTATGTGAATGCTCATGCAACATCAACATTAGCTGGTGATTTGGCTGAGGTTAATGCAATCAAAAAGGTTTTTAAGAACACATCAGAATTGAAAATGAATGCTACTAAGTCAATGATTGGTCATGGTCTTGGTGCTGCTGGTGGGTTGGAAGCTATAGCAACTATCAAAGCAATAAATAGTGGCTGGTTACATCCAACCATTAACCAAGATAACTTGGAGTCTAATGTTACAATTGACACAGTCCCTAACGTTAAGAAGAAGCATGAAGTTAATGTTGGAATTTCCAACTCATTTGGGTTTGGTGGGCACAATTCTGTAGTGGTGTTCTCACCATTTAAGCCCTAA 1479 0.4226 MASIVVTCNSGSLLRKRVSENNGVSLVKHDELRLDHRMQIPSATSMLTRNISASASRSRTIKAMASSTVAAPKRETDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFDASNFSVRFGGQIRDFSSAGYIDGKNDRRLDDCWRYCIVAGKKALDDANLGHEVLQTMDRTRIGVLVGTGMGGLTAFSSGVEALMQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAIIPIGVGGFIACRALSQRNEDPKKASRPWDKARDGFVIGEGSGVLIMETLESATKRGATILAEYLGGAVTCDAHHMTDPRSDGLGVSSCIIKSLENAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKNTSELKMNATKSMIGHGLGAAGGLEAIATIKAINSGWLHPTINQDNLESNVTIDTVPNVKKKHEVNVGISNSFGFGGHNSVVVFSPFKP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1458 492 Pfam Beta-ketoacyl synthase, C-terminal domain 334 447 IPR014031 -
Lal15g1458 492 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 40 492 - -
Lal15g1458 492 CDD KAS_I_II 80 487 IPR000794 -
Lal15g1458 492 SMART Beta-ketoacyl synthase 82 492 IPR020841 -
Lal15g1458 492 Gene3D - 47 491 IPR016039 GO:0016746
Lal15g1458 492 Pfam Beta-ketoacyl synthase, N-terminal domain 80 326 IPR014030 -
Lal15g1458 492 SUPERFAMILY Thiolase-like 294 489 IPR016039 GO:0016746
Lal15g1458 492 PANTHER POLYKETIDE SYNTHASE-RELATED 40 492 IPR000794 -
Lal15g1458 492 ProSitePatterns Beta-ketoacyl synthases active site. 234 250 IPR018201 GO:0004315|GO:0006633
Lal15g1458 492 SUPERFAMILY Thiolase-like 80 331 IPR016039 GO:0016746
Lal15g1458 492 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 80 487 IPR017568 GO:0006633|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1458 Lal-Chr15 16803365 16806865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1458 38 492 Acyl Lipid Metabolism Gene Families AT5G46290 73.573 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1458 K09458 - gmx:100798044 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1458 15 16803365 16806865 Lal15g1458 15 16803365 16806865 ECH