Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1367 ATGTCTTCTGATAGTGCAAAGGAAAATATACCGCTAGTTGTTTCATCGGTGACTGAACGGAAACGGGACCTTGGAAATTTAGATGACCCAGAGAGATCAAGTTACAAGGCTAATGAGGAAAGCAATCCAACTAGGGCTGACAAAGTGGGACATTCTCATTGTCATACTGGGCTTTCAACTCTAACTCAAATGGAAAAATTGTATAATACAAAGTATTTTATCATTAAGAGTTTGAACCACCAAAATATTAGTTTGTCAGTCGAGAAAGGAATGTGGGCTACTCAAGTAATGAATGAACCAATTCTGGAAGAAGCCTTTCAAAATTCAGGTAGAGTAATACTCATATTTAGTGTCAATATGAGTGGTTCCTTCCAAGGGTATGCACAGATGATGTCCTCTATTGGGAAGAGGAGAGACAGAAACAATATTTGGACTGACAGAAGTGGTAGAAGTAATCCCTGGGGTCACAGTTTTAAGGTCAAATGGCTGCGGTTATATGACTTGCCTTTCCATAAGACTATTCATCTCAAGAATCCATTGAATGACTATAAACCTGTCAAAATTAGCAGAGATTGCCAGGAGTTGTCTCCAGAAATTGGTCTAGCTCTTTGTGAACTCCTTGATGGTAACACTGATTCGGACGACCCGTTGAGCAGTTCATCCAGGGATAGTTTTTCTTTGAAGGGGCAGTCTGCAGAGATTCAAAGCTTCATGGCTGGCGAAGACTGTAACTTCCCCCCACAGCATAGTTCTTGGTCAATGCCTCTGCCTTATCCTTCCGTGCCATACCACAATCTAGCTGAAGTAAATAGATTTCATTCAGCAAATCATAGATTCAGTGGCTCAAATTTCACTGGAATGTTGCCTAGTAAACGTTCTCATTTTAGTAGGAATATTCCTAAGCTAAAAGTTGAAAGGAATGTGGCTTCTCAACTTGATGTTTGGGGTCTTTCTGCTGAAAGCCCGTTAGCTACCACCCTAACCGAAGATGATTTTCTTGACATGTCCTACGAAGAATACCTAGAGGTTCATGACAGATGCAGGAAACAATTATGCTCCGGGGCATCTAAACCGTCTCAGACACAGTCGGAACCATCGAGAAGTAATTCACACGATGATGATAGGAACCTGAACAAGCCTGACAGAGACAGGAGCAGAAGGATTCTTCAGTAG 1173 0.4152 MSSDSAKENIPLVVSSVTERKRDLGNLDDPERSSYKANEESNPTRADKVGHSHCHTGLSTLTQMEKLYNTKYFIIKSLNHQNISLSVEKGMWATQVMNEPILEEAFQNSGRVILIFSVNMSGSFQGYAQMMSSIGKRRDRNNIWTDRSGRSNPWGHSFKVKWLRLYDLPFHKTIHLKNPLNDYKPVKISRDCQELSPEIGLALCELLDGNTDSDDPLSSSSRDSFSLKGQSAEIQSFMAGEDCNFPPQHSSWSMPLPYPSVPYHNLAEVNRFHSANHRFSGSNFTGMLPSKRSHFSRNIPKLKVERNVASQLDVWGLSAESPLATTLTEDDFLDMSYEEYLEVHDRCRKQLCSGASKPSQTQSEPSRSNSHDDDRNLNKPDRDRSRRILQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1367 390 MobiDBLite consensus disorder prediction 367 390 - -
Lal15g1367 390 MobiDBLite consensus disorder prediction 1 51 - -
Lal15g1367 390 MobiDBLite consensus disorder prediction 21 51 - -
Lal15g1367 390 ProSiteProfiles YTH domain profile. 70 207 IPR007275 GO:0003723
Lal15g1367 390 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 16 322 - -
Lal15g1367 390 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 16 322 IPR045168 -
Lal15g1367 390 MobiDBLite consensus disorder prediction 352 390 - -
Lal15g1367 390 Pfam YT521-B-like domain 71 207 IPR007275 GO:0003723
Lal15g1367 390 Gene3D ph1033 like domains 50 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1367 Lal-Chr15 15798439 15803046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1367 K20100 - gmx:100784130 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1367 15 15798439 15803046 Lal15g1367 15 15798439 15803046 ECH