Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1346 ATGGCTTTTTCAAAAGCTCTATTTCTCTTTCTGATCAACATTTCTTTGTTTCTCACCTTTTCTTATGCTACTGATCCATTTGTTTCCTTTGATTTTGAGGTCTCTTACATCACTGCTTCTCCTCTTGGAATTCCTCAACAGGTCATTGCTATCAATGGTGACTTTCCAGGTCCTATAATCAATGTAACCACAAACAACAATGTTGCTGTCAATGTTAGAAACAAGTTGGATGAGAGTCTACTTATTCATTGGTCTGGGATTCAGCAAAGGAGGGGTTCATGGCAAGATGGAGTTCTTGGAACAAATTGTCCAATTCCTTCTAAATGGAATTGGACTTACAATTTTCAGGTGAAGGATCAGATTGGAAGCTTTTTCTACTTTCCTTCTCTGCATTTGCAAAGAGCAGCTGGTGGATTCGGGGGTTTCATAATAAACAATCGCGCTATCATTCCTATTCCTTTCGATACCCCATACGGGGATATTGTGATTTTTATTGGAGATTGGTACACGCGTAATCATACGGATTTGAGGAAGGACCTTGACGACGGAAAAGATCTTGGCATGCCAGATGGTGTTCTCATCAATGGGAAAGGTCCTTATAGATATAATGATACACTTGTTCCTGATGGCATTGATTTTGAGAAAATTGAAGTCCATCCTGGAAAAACTTACCGAATTCGTGTACATAATGTTGGAGTGTCAACAAGTCTGAATTTCAGGATCCAGAGCCATAACTTACTTCTAGCAGAGACTGAGGGATCTTATACGGTGCAACAGAACTACACTAGCTTAGATATTCATGTCGGACAATCTTATTCTTTTTTGCTCACCACGGATCAGAATGCGAGTACAGATTACTACATTGTTGCAAGTGCCAGGTTTGTTAATGAATCACGTTGGCAAAGAGTTACTGGAGTTGGGATCCTGCACTATACAAACTCGAAGGGGAATGCACGCGGTCCTCTCCCACCAGCTCCGGATGATCAATTTGACAAAACATACTCAATGAACCAAGCAAGATCTATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAATCCACAAGGATCTTTCAGATATGGTTCCATAAATGTGACAGAGATTTATGTTTTAAAAAATAAGCCACCCGAAAAGATTGGTGGAAAGCGCCGAGCAACACTCAGTGGAGTCTCTTTTGTCAATCCTTCCACTCCAATCAGACTAGCTGACCAATTCAAAGTAAAAGGCGTATACAAGCTTGATTTTCCCACCAAGCCGTTGACCGGACCACCTCGGGCAGAAACATCTGTAATTAATGGAACTTATAGAGGATTTATGGAAATTATACTGCAGAATAACGACACCAAGATGCACACCTATCACTTGAGTGGATATGCATTTTTTGTAGTTGGGATGGATTATGGTGATTGGTCCGATAATAGCCGGGGCACATATAACAAGTGGGATGGAATAGCTCGCAGTACAACACAGTTGAAACTTTATGTTGCAACTGGAAATAGACCTCCAGTTTATCATATTGATAATAACATGGTTCAGAGTGTTAAAGTTCCTTCTCAAAACCAATTGGCTATGAGAGGAGTAGTCCAACAGGTTTATCCTGGTGCATGGACCGCAATTCTGGTCTCCCTAGACAATGTCGGAGTATGGAACATCCGAACAGAAAACCTCGATTCATGGTATCTTGGTCAAGAAACATATATCAGGGTTGTCAATCCAGAAGCTACCAACAAAACAGAGCTGCCCATGCCAGTCAATGCACTTTTCTGCGGCGCCCTCGATAAAATGCAGAAGCCTCAGCATATTGCTTCTTCAGCTCAATTAGTTAAAGGGAAAAAGTTCCTCACTTGGTTAATGTTTGTATGTGCCTTAATCATCATTTTGCACTAA 1890 0.4106 MAFSKALFLFLINISLFLTFSYATDPFVSFDFEVSYITASPLGIPQQVIAINGDFPGPIINVTTNNNVAVNVRNKLDESLLIHWSGIQQRRGSWQDGVLGTNCPIPSKWNWTYNFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRAIIPIPFDTPYGDIVIFIGDWYTRNHTDLRKDLDDGKDLGMPDGVLINGKGPYRYNDTLVPDGIDFEKIEVHPGKTYRIRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLLTTDQNASTDYYIVASARFVNESRWQRVTGVGILHYTNSKGNARGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPPEKIGGKRRATLSGVSFVNPSTPIRLADQFKVKGVYKLDFPTKPLTGPPRAETSVINGTYRGFMEIILQNNDTKMHTYHLSGYAFFVVGMDYGDWSDNSRGTYNKWDGIARSTTQLKLYVATGNRPPVYHIDNNMVQSVKVPSQNQLAMRGVVQQVYPGAWTAILVSLDNVGVWNIRTENLDSWYLGQETYIRVVNPEATNKTELPMPVNALFCGALDKMQKPQHIASSAQLVKGKKFLTWLMFVCALIIILH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1346 629 Pfam Multicopper oxidase 400 493 IPR011706 GO:0005507|GO:0016491
Lal15g1346 629 Pfam Multicopper oxidase 506 573 IPR011706 GO:0005507|GO:0016491
Lal15g1346 629 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 529 602 - -
Lal15g1346 629 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 491 - -
Lal15g1346 629 PANTHER MULTI-COPPER OXIDASE 12 491 IPR045087 -
Lal15g1346 629 PANTHER MULTI-COPPER OXIDASE 529 602 IPR045087 -
Lal15g1346 629 Pfam Multicopper oxidase 160 313 IPR001117 -
Lal15g1346 629 SUPERFAMILY Cupredoxins 21 174 IPR008972 -
Lal15g1346 629 Gene3D - 363 601 IPR008972 -
Lal15g1346 629 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Lal15g1346 629 Gene3D - 158 351 IPR008972 -
Lal15g1346 629 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Lal15g1346 629 Gene3D - 18 146 IPR008972 -
Lal15g1346 629 SUPERFAMILY Cupredoxins 378 590 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1346 Lal-Chr15 15561343 15566335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1346 - - gmx:100798971 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1346 15 15561343 15566335 Lal15g1346 15 15561343 15566335 ECH
Lal15g1346 15 15561343 15566335 Lal16g1283 16 9043846 9048340 LSH