Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1321 ATGGGCACTCGAACAAATTTCTACAAGAATCCTTCAATTTCTTACAACAAGCATTTCAGTCTCTCCTCCGTTCTTCAGAACCTCCAAGCTTACAACGTTGCCACCGGCAATGTTCTTCCGGGGGATCAACCTCAACCCGACCTCACCACCGCCTCCGACCATAAAACTCCCTCCCTCAAACGCCGCCGGCCACCTCAACCCCGTGCCGGAGATGATGATGATGATGACAATGATGCCCCCTTCTCTATGAAAGAAGTTGCTTCATCTCGAAGTCATGATCGTGTTGAACTGACTGAAGATGTTTTGGGAAACCCTAATTCTGCTGTAGCATTGGTTGATTATGCAAGTGAAAGTGATGAAGGTACTCCATCAAAATGTCAAGAAACACATAATCAAAGTTCTGGTCACACAAAAGAATTTGATGGAATCAAAAGCCGAAATGAGCAGCGTTTTCCTGTCTCTGGAGAACCTGTTTGTCTTATATGTGGAAGATATGGCGAGTATATATGCAATGAGACGGATGATGATGTCTGTAGCATGGAGTGCAAACGTGAACTTTTGGAAATTCTTAAACTGAATGAGGGGTCCACCCACAACCAAGTTAGAGACTTCTCATCTGGAATTAGTGATGCCTCTCCTGTTCCTGTGTTTGGTGACGATACCTGGGATTATAATCGGCACCGCTGGTCAAAAAAGATATCTAGCCTTTCTACTTATGAATGTTGGAAATGCCATAAACCTGGGCACGTAGCTGAAGATTGTATAGTAAATAGTTGCAGTGAGATCATAGTGCCTAGTAATAGATCTAGTTCCATTCCAAAGGATCTTCTTGGACTGTATAGAAGTGTTATTCCTAGTCTTTTTTCATCTTCTTCAGTTTCAGTTAACATTCTGAAGTGCATATTGTCTGGTTGGGTTGTAAGGAATCTGAATGATAAATATGAGTTCCTACTGAAAAAGTCAATAAGATGCCACGAATTTGGTAAAGACTTATTGGCTGCAAATTGTAATACATGTCGCAGCACATCAAATTTGGCAGCATGCCTTGATTGTAGCATTGTCTTTTGTGACAGGGCAGGTCACTTGAATGAGCATATAAGAGCATACCCATCCCATCAAAAATATTACTCACACAAACTTAAACGGCTGGTAAAATGCTGCAAGTCAACATGCAAGGTTACTGACATCAAGGATCTTTTGGTTTGCCACTACTGCTTTGATAAAGCCTTTGAAAAATTCTATGACATGTATACTGCAACATGGAAAGGAGCTGGGCTTTCAATCATATGGGGCTCTATTTGCTGTGAGGACCATTTTACCTGGCACAGGATGAATTGCTTGAATGCAGGTGTGGAAGAAAGTGCATATATTGTAAAAAACAGTGGCCATAAAAGCAAACACACGCAACTTAGTGACTTCATTTTTTGA 1428 0.4146 MGTRTNFYKNPSISYNKHFSLSSVLQNLQAYNVATGNVLPGDQPQPDLTTASDHKTPSLKRRRPPQPRAGDDDDDDNDAPFSMKEVASSRSHDRVELTEDVLGNPNSAVALVDYASESDEGTPSKCQETHNQSSGHTKEFDGIKSRNEQRFPVSGEPVCLICGRYGEYICNETDDDVCSMECKRELLEILKLNEGSTHNQVRDFSSGISDASPVPVFGDDTWDYNRHRWSKKISSLSTYECWKCHKPGHVAEDCIVNSCSEIIVPSNRSSSIPKDLLGLYRSVIPSLFSSSSVSVNILKCILSGWVVRNLNDKYEFLLKKSIRCHEFGKDLLAANCNTCRSTSNLAACLDCSIVFCDRAGHLNEHIRAYPSHQKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGLSIIWGSICCEDHFTWHRMNCLNAGVEESAYIVKNSGHKSKHTQLSDFIF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1321 475 Gene3D - 140 196 - -
Lal15g1321 475 MobiDBLite consensus disorder prediction 116 143 - -
Lal15g1321 475 MobiDBLite consensus disorder prediction 54 70 - -
Lal15g1321 475 ProSiteProfiles Zinc finger CCHC-type profile. 241 254 IPR001878 GO:0003676|GO:0008270
Lal15g1321 475 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 323 475 - -
Lal15g1321 475 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 281 - -
Lal15g1321 475 SUPERFAMILY Retrovirus zinc finger-like domains 226 254 IPR036875 GO:0003676|GO:0008270
Lal15g1321 475 MobiDBLite consensus disorder prediction 36 53 - -
Lal15g1321 475 MobiDBLite consensus disorder prediction 36 103 - -
Lal15g1321 475 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 281 - -
Lal15g1321 475 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 323 475 - -
Lal15g1321 475 SMART c2hcfinal6 240 256 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1321 Lal-Chr15 15159537 15167507 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1321 - - gmx:100814892 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1321 15 15159537 15167507 Lal15g1321 15 15159537 15167507 ECH