Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1000 ATGGCTTGCCACATCAATTTCTCTTTCTCTGAATTCAAATTCAATCCTCACACTTTCAATACTTCATCTTCTTCTTCTTCATCATCTTCGTCATCGTCACCGTCGTATACCCGTCGATGGTTCAATCCCCTGCGTCGTAGAAACTCCGATAACTCCTCCGAAATCCAACGCCATTGGATTGAAGCCCCCAATCACTCCATTTCTTCTCCGCAAAGATTCACTGTTGCATCTTATAACATACTCGCAGATAGAAATGCACAACAACACTCTGATTTATATTTAAATGTTCCTTCTCGTTACATTAGTTGGGATCGTCGTAAGAATGTTATTTCTAATGAACTTTTTGGATTGGACCCTCATATTCTCTGTTTACAAGAGGTGGACAAGTATGTTGAACTCTCAGATATTTTGGTTAAAGCAGGATATATAGGAACTTATAAGAGGCGCACTGGAGATACAGCTGATGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTATTAGAAGAAGAGAACATTCAATTTAAGGACATTGGCCTTTGTGATAATGTTGCTCAACTTTTAGTTTTTGAGATGTGTGAATCTGAATCAAGAAGACTGATAGTTGGTAACATTCATGTACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGGCCAAATTCGTTTTCTCTTGTCAAGAGCACAGGCCCTCTCAGAGAAATGGGGTAGTGCCCCTATTGTGCTTGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCTTCTGAGCTTAATATCTTGTTGTATGACAGAAAGGAATTATCTGGACAGAAAAGCTGTCGTCCTGCTCAGGTTTTAGGCGAGAAAAAAGAAACAGTTCGTCCATTTATCTTACCGGATGGATTGTTAAAGTGCTGGACAGATGAAGAGGTTAAAGTTGCAACTGGTGATTCTGAGCGTTATTTGGCTGTGCATTCGTTGAAGCTGAATAGCTCTTATGCCACAGTTAATGGTTCGACTAGTACACGAGGATTCAACGGTGAACCCTTGGCAACTTCTTATCACTCAAAGTTCCTTGGTACTGTAGATTACTTATGGTATTCTGAAGGTATTGTACCAACAAGAGTTCTTGATACTGTTCCAATTGGTGATCTTGTGAGGACAGGTGGCCTACCAAGCAAGAGAATGGGAAGCGACCACTTGGCCTTGGTTTCTGAATTTTCATTCTCAGTTACCAACAACGAATCTGCCGAAATGGTTGCGGCTGCAGCATCACCTAGACTATGTATTGAGACTGGCAATCTGGAGTCATAA 1314 0.4056 MACHINFSFSEFKFNPHTFNTSSSSSSSSSSSSPSYTRRWFNPLRRRNSDNSSEIQRHWIEAPNHSISSPQRFTVASYNILADRNAQQHSDLYLNVPSRYISWDRRKNVISNELFGLDPHILCLQEVDKYVELSDILVKAGYIGTYKRRTGDTADGCAMFWKADKFRLLEEENIQFKDIGLCDNVAQLLVFEMCESESRRLIVGNIHVLYNPNRGEVKLGQIRFLLSRAQALSEKWGSAPIVLAGDFNSTPQSGIYKFLSSSELNILLYDRKELSGQKSCRPAQVLGEKKETVRPFILPDGLLKCWTDEEVKVATGDSERYLAVHSLKLNSSYATVNGSTSTRGFNGEPLATSYHSKFLGTVDYLWYSEGIVPTRVLDTVPIGDLVRTGGLPSKRMGSDHLALVSEFSFSVTNNESAEMVAAAASPRLCIETGNLES 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1000 437 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 18 411 - -
Lal15g1000 437 Gene3D Endonuclease/exonuclease/phosphatase 46 425 IPR036691 -
Lal15g1000 437 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 18 411 - -
Lal15g1000 437 Pfam Endonuclease/Exonuclease/phosphatase family 76 400 IPR005135 GO:0003824
Lal15g1000 437 SUPERFAMILY DNase I-like 57 412 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1000 Lal-Chr15 8028233 8034970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1000 73 261 EF-hand Containing Proteins AT5G54130 28.431 1.82e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1000 - - aip:107630317 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1000 15 8028233 8034970 Lal15g1000 15 8028233 8034970 ECH