Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0980 ATGGAAGAATCTCCCAAGGCTTGTTCCTCTTTTAGCCTTTCAGTTGAGCAAGCACCACCAGAATCTCCTCATGAGGCATTGTTTCTAGTCTTATCTTACCTTACTGTATATGAGTTACTACTCATATCTCAAGTTTGCACATCATTAAGAGATGCAGTGAGCAATGATGTGTTACCATGGTTGAACCTTGTTGTTGAAAGGCCTCTAAGTTATAGACTCTCAGATGAGATTCTTTTGAAAATCACTTCCAAGGCCAATGGTAGCCTCAAAACTCTGGCTTTGATCAACTGTGTGCATATTACTGACCAGGGGCTTCAAAGGGTCATAGAACAAAACCATCTCATAAGCAAGCTCTATATACCATCATGTACTAGAATAACCCCCGAAGGAGTTCTAAGATCAGTGGAAATACTATGCCAAGGAAGCCATTCCTTAAGCTCCATAATGATAAATGGCATCTACAACATACAGAAGGAACATCTTGACATGCTTTCCTTTTACCTTAGAAAGAATCAGTCATTAGAGGAGCAGCAAATGAAGCAACCGATTTACTATCACGAACGCGGTAACTTATCCGTATTCGAAAAAAAGCAGCGGGTTATTGATTTGGAGATATGTCCTATGTGCTTTGAGGTAAGGATGGTTTATGATTGTCCTGAAGGTGAGTGCAACAAGAGGGAATGTAGGGGATGCAGTTTTTGTATTCCAAGGTGTGAAAACTGTGGTAGATGCCTTGGATCACAAGAAATGGAAGAGTGTGCCTGTGGAGATAACTTGTGCCTTGATTGTTGGTTAAAAGAGTTTCCTAAGTGCAGTTTCTGTAACAAACCATATTGTAAGCAACACACAAGTTGGTGGTACAATTCTTCAGACCCTGGATTCATATGTAAAGTTTGTGAAGAAAATTCTCATGGATATACTTACACTGATGAGGTATGA 939 0.3994 MEESPKACSSFSLSVEQAPPESPHEALFLVLSYLTVYELLLISQVCTSLRDAVSNDVLPWLNLVVERPLSYRLSDEILLKITSKANGSLKTLALINCVHITDQGLQRVIEQNHLISKLYIPSCTRITPEGVLRSVEILCQGSHSLSSIMINGIYNIQKEHLDMLSFYLRKNQSLEEQQMKQPIYYHERGNLSVFEKKQRVIDLEICPMCFEVRMVYDCPEGECNKRECRGCSFCIPRCENCGRCLGSQEMEECACGDNLCLDCWLKEFPKCSFCNKPYCKQHTSWWYNSSDPGFICKVCEENSHGYTYTDEV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0980 312 Gene3D Ribonuclease Inhibitor 61 181 IPR032675 -
Lal15g0980 312 Pfam F-box domain 23 58 IPR001810 GO:0005515
Lal15g0980 312 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 19 306 - -
Lal15g0980 312 SUPERFAMILY RNI-like 75 175 - -
Lal15g0980 312 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 228 239 IPR017900 -
Lal15g0980 312 PANTHER F-BOX PROTEIN SKIP28 19 306 - -
Lal15g0980 312 SUPERFAMILY F-box domain 23 71 IPR036047 GO:0005515
Lal15g0980 312 ProSiteProfiles F-box domain profile. 23 63 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0980 Lal-Chr15 7773532 7775933 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0980 - - lang:109340729 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0980 15 7773532 7775933 Lal15g0980 15 7773532 7775933 ECH