Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0930 ATGCCTCACTACTCAGCCATTTTTCAAGGCTACCTCAGATTCAAACCTACTTTCTCTATTCCTTTCTTCACCGCCATGTCTCTCCGTCCTCAACCTATTTCCCTCTCTCGCAGAGGCCTCCACCTCCACCCTGCCGCCGTTAACACCTCTCGCCTCCGTTCTATTCGTCTTCCCTCATGCTCCGTCGCAATTGATCTTGATAGCTCCGATAACCGTCGACGTGGTCCAGGATTTAAACAAAGAACCGTTGCTGTGCCGTTTTGGACTCAACAGACCTCTGGTTATGGTCGTTTTGCTTATCAAGACTTTAATTCTGATGATGATGAAGATGATGATTCTGATGTTGAGTTTTTCTCTTCTCACTCTCGCACTCGAACTCAACCAAAACAACAACAAAAACAACAAAAACCGGGTGAGTCAACTCATGAAAACATTGACGAGTGGAGATGGAAGCTGACCATGCTTCTTCGCAATACAGATGAACAAGAAGTGATGTCCAGGGAGAAAAAAGACCGGCGTGATTTTGAACAGCTTTCAACTTTAGCGACAAGGATGGGTTTACATAGCCGGCAATATGCAAGAGTTGTTGTCTTTAGCAAAGCACCTCTGCCAAATTACCGCCCTGATCTTGATGATAAGCGTCCACAAAGAGAGGTAATCTTACCACTTGGTGTCCATAGAGAAGTAGACAGTCATCTCCGTGCCCATCTTTCACAAAAGGCTACAAACAAGATAGCCTCTTTTGACGATTCCTTGTATAGATCAAGTGATGGCAGAAACAATCTTGCCAGTGAAGGAATTTATGGGCGGCCAGAGCCCATGACCCATACCAGTATTGCCAAGGAGAAAATCCTTCAACGGAGAAGTTTGCAACTGCGTAATCAGCAACAAGATTGGCAGGAGTCTCCGGAAGGTAAAAAGATGCTTGATTTTCGTAGAAGTCTTCCTGCGTTCAAAGAGAAGGATGCATTTTTGAAAGTCATTTCAGAGAATCAGGTCGTTGTTGTCTCAGGTGAAACTGGTTGTGGTAAGACCACACAACTTCCTCAATACATATTAGAATGCGAGACTGAAGCTGCACGTGGAGCTGTATGTAACATAATTTGTACTCAACCGAGAAGAATATCTGCCATGTCTGTTTCTGAAAGAGTTGCAGCAGAACGTGGGGAGAAATTGGGAGAATCTGTTGGCTACAAAGTTCGTCTGGAAGGTATGAAAGGAAGGGACACCCGGCTTCTTTTCTGCACTACAGGTGTATTATTGCGGAGATTACTTGTTGATCGGAGTTTAAATGGTGTAACTCATGTTATTGTTGATGAAATTCATGAACGTGGAATGAATGAAGATTTTCTTCTCATTGTCCTGAAGGATCTTCTTCCTCGCCGACCTGATTTGAGGTTAATTTTGATGAGTGCAACCTTAAATGCCGAGCTTTTCTCTTCCTACTTTGATGGTGCTCCGACCATGCATATTCCTGGTTTTACATATCCAGTTCGTACCCATTTTCTTGAGGATATTCTGCAAATGACTGGATATCAACTGACTCCTTATAATCAAATTGATGACTATGGTCAACAAAAAACATGGAAAATGCAGAAACAAGCTGATGCTTTCAAGAAGAGAAAGAGCCAGATTGCATCTACTGTTGAGGATGCACTGGAAGTAGCAGACTTTAAGGGGTATAGCCCACGGACTCGTGAGTCATTGTCCTGTTGGAGCCCTGACTCAATTGGTTTTAACCTTATTGAACGCGTTCTTTGCCACATTGTCAAGAATGAAAGGCCGGGTGCTGTTTTGGTTTTTATGACTGGTTGGGATGATATAAACTCCTTGAAGAATCAGCTTCAAGCTCATCATTTGTTGGGTGATCAGAGTCAAGTATTGCTTCTTGCATGCCATGGCTCCATGTCCAGCTCTGAGCAGAGGTTGATATTTGACAATCCTGAAGGAGGGGTGAGGAAAATTGTTCTTGCAACTAATATGGCCGAAACTAGTATTACAATCAATGATGTTGTCTTCGTGGTTGATTGCGGAAAGGCAAAAGAGACATCATATGATGCACTAAATAACACTCCTTGTTTGCTTCCGTCTTGGATTTCAAAAGCTGCCGCTCGGCAGAGAAGAGGAAGGGCTGGCCGTGTTCAATCTGGTGAATGTTACCATCTTTATCCCCGATGTGTTTATGATGCTTTTGCTGATTACCAATTGCCAGAGCTTCTAAGAACACCTCTGCAGTCTTTATGCCTGCAAATCAAAAGTCTACAACTTGGAAGCATCTCTGAGTTTTTATCTAGAGCTTTGCAGTCACCAGAGCCTTTATCGGTTCAAAATGCTGTTGAGTATTTAAAGACTATTGGGGCCTTAGATGAGGATGAGAATTTGACAGTTCTAGGGCGCAAGTTGTCAATGCTTCCCGTAGAGCCGAAACTTGGCAAAATGCTCATTTTGGGTGCTATCTTCAAATGTTTAGATCCTATAATGACTGTTGTTGCTGGTCTTAGTTTAAAAGATCCATTTATGATGCCGGCTGACAAGAAGGATCTTGCAGAGTCTTCCAAGGCCCACTTTGCTGGGCGTGCCTATAGTGATCATCTTACACTTATCCGGGCTTATGAGGGTTGGAAAGAGGCTGAAGCACAGCAAGCTGGTTATGAGTACTGTTGGCGAAATTTCCTTTCTTCTCAAACACTTAGAGCCATTGACTCTCTTCGGAAGCAATTCTTTTACTTGCTCAAAGATACTGGGTTGGTTGATCACAATTCTGTAGCCTACAACACATGGAGTCATGAGGAGCATCTACTGCGAGCTGTCATCTGTGCAGGATTGTTTCCTGGAGTATCCTCAGTTGAGAACAAACCTAAGTCGATAACACTTAAAACAATGGAGGATGGTCAGATTCTTTTGTCTGGAAACTCTGTAAATGGTAATGTACCCAGAATTCCGTATCCATGGTTAGTATTTAATGAAAAGGTGAAAGTGAATTCAGTATTTCTTAGGGATTCAACTGGGATATCTGATTCTGTGCTGCTCTTATTTGGTGGGAATATATCCAGAGGTGGCCTAGATGGTCACCTGAAAATGTTGGAAGGGTATTTGGAATTTTTCATGAAACCTGAATTAGCCAAGACTTACTTAAGCTTAAAGAGTGAACTGGAGGAATTGGTACAGAAAAAACTTATGGATCCCAAGTTGGATATACAATCACATAATGAGCTTCTTTCAGCTGTAAGATTGTTGGTATCAGAGGACAATTGTGAAGGCAGATTTGTTTTCGGTCGCAAGGGCCAATCACAGTTAAAGAAGGAAGTGAACTCCAAAAGTGGTGGTGGTGGTGGTGGTGAAGGCGAGACTGATAATTTTAAAAATCACCTCCAAATGTTCCTTAACAGGGCTGGACACGAATCACCAACATACAAAACAACGCAACTGAAAAACAATCAATTCCGTTCTACTGTCATATTTAATGGCTTGAATTTTGTTGGCCAGCCATGCGTCGGCAAGAAATTAGCAGAAAAATCTGCTGCTGCTGAAGCTATTCTATGGTTAAGGGGAGATACTCAGTCGCCTAACAATGATGATATTAACCATGCGTCTGTGGTTCTGAAAAAGAGCAACAAGAAAAATAAGAACAAATCATTTAATAGTGCGAAATGGAGTTGA 3660 0.4246 MPHYSAIFQGYLRFKPTFSIPFFTAMSLRPQPISLSRRGLHLHPAAVNTSRLRSIRLPSCSVAIDLDSSDNRRRGPGFKQRTVAVPFWTQQTSGYGRFAYQDFNSDDDEDDDSDVEFFSSHSRTRTQPKQQQKQQKPGESTHENIDEWRWKLTMLLRNTDEQEVMSREKKDRRDFEQLSTLATRMGLHSRQYARVVVFSKAPLPNYRPDLDDKRPQREVILPLGVHREVDSHLRAHLSQKATNKIASFDDSLYRSSDGRNNLASEGIYGRPEPMTHTSIAKEKILQRRSLQLRNQQQDWQESPEGKKMLDFRRSLPAFKEKDAFLKVISENQVVVVSGETGCGKTTQLPQYILECETEAARGAVCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRSLNGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTYPVRTHFLEDILQMTGYQLTPYNQIDDYGQQKTWKMQKQADAFKKRKSQIASTVEDALEVADFKGYSPRTRESLSCWSPDSIGFNLIERVLCHIVKNERPGAVLVFMTGWDDINSLKNQLQAHHLLGDQSQVLLLACHGSMSSSEQRLIFDNPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQSGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQSPEPLSVQNAVEYLKTIGALDEDENLTVLGRKLSMLPVEPKLGKMLILGAIFKCLDPIMTVVAGLSLKDPFMMPADKKDLAESSKAHFAGRAYSDHLTLIRAYEGWKEAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDTGLVDHNSVAYNTWSHEEHLLRAVICAGLFPGVSSVENKPKSITLKTMEDGQILLSGNSVNGNVPRIPYPWLVFNEKVKVNSVFLRDSTGISDSVLLLFGGNISRGGLDGHLKMLEGYLEFFMKPELAKTYLSLKSELEELVQKKLMDPKLDIQSHNELLSAVRLLVSEDNCEGRFVFGRKGQSQLKKEVNSKSGGGGGGEGETDNFKNHLQMFLNRAGHESPTYKTTQLKNNQFRSTVIFNGLNFVGQPCVGKKLAEKSAAAEAILWLRGDTQSPNNDDINHASVVLKKSNKKNKNKSFNSAKWS 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0930 1219 SUPERFAMILY dsRNA-binding domain-like 1118 1186 - -
Lal15g0930 1219 SMART helicmild6 609 715 IPR001650 -
Lal15g0930 1219 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 120 1112 - -
Lal15g0930 1219 MobiDBLite consensus disorder prediction 1185 1219 - -
Lal15g0930 1219 Pfam Helicase associated domain (HA2) 778 866 IPR007502 GO:0004386
Lal15g0930 1219 MobiDBLite consensus disorder prediction 1100 1119 - -
Lal15g0930 1219 MobiDBLite consensus disorder prediction 120 138 - -
Lal15g0930 1219 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 325 492 IPR014001 -
Lal15g0930 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 894 IPR027417 -
Lal15g0930 1219 CDD SF2_C_RHA 496 723 - -
Lal15g0930 1219 Pfam Helicase conserved C-terminal domain 586 714 IPR001650 -
Lal15g0930 1219 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 581 755 IPR001650 -
Lal15g0930 1219 SMART ha2_5 777 868 IPR007502 GO:0004386
Lal15g0930 1219 MobiDBLite consensus disorder prediction 99 144 - -
Lal15g0930 1219 CDD DEXHc_RHA-like 331 491 - -
Lal15g0930 1219 Gene3D - 757 857 - -
Lal15g0930 1219 Pfam DEAD/DEAH box helicase 325 476 IPR011545 GO:0003676|GO:0005524
Lal15g0930 1219 Gene3D - 575 733 IPR027417 -
Lal15g0930 1219 Gene3D - 1114 1186 - -
Lal15g0930 1219 Pfam Double-stranded RNA binding motif 1121 1182 IPR014720 -
Lal15g0930 1219 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 934 1016 IPR011709 -
Lal15g0930 1219 Gene3D - 271 493 IPR027417 -
Lal15g0930 1219 SMART DRBM_3 1120 1183 IPR014720 -
Lal15g0930 1219 SMART ultradead3 313 506 IPR014001 -
Lal15g0930 1219 PANTHER ATP-DEPENDENT RNA HELICASE 120 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0930 Lal-Chr15 7133594 7145445 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0930 K14442 - gmx:100791006 1856.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0930 15 7133594 7145445 Lal15g0930 15 7133594 7145445 ECH