Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0857 ATGCATAAAAAAATTTCAACTTTTGATTCTAACCATTGTGAAAGGTTATCATGGGAACGTTCCACCCAAGATATTTTATTGGGGAAAATTAGATTTTCTTTGAGAAATCACCAAGTGAATGAAGCATGGGAATGTTTTCATGATTATAGAAAACTTTATGGTTACCCTGAGGTTCACCTTGTGAACCAGCTTATTGTTCAGTTGTCTTATTCTTATGATCGTGTTTGGATGAGAAGAGCTTGTGATTTGGTTTTGCAAATTGTTGAGCAGAAACCTGGGTTCCTTAATGCTGATACCTTAGTAAAACTTGCATTATCTTTGGCTAGATTGCAAATGCCGGGTCCGGCTTCAGCGATTCTCAGGTTGTTGCTGAAGAAAGGGTGTGTACCACCTATGAATTTGTTGTCATTGATTGTTTTGCATCTTGTGAAGACCGAAATTGGAACATGTCTTGCATCCAATTTTCTTACCCAACTTTGTGATTTTTATAATACCTTGAATGATAAAAAGTCACATCATGTGGTCATGGTAAAGCCGGATACATTGATCTTTAACCTTGTTCTTGATGCTTGTGTAAGGTTTAAATTATCTTTGAAAGGCCTTGTCCTTGTTGAGTTAATGCCCCTGACTGAGACAGTGGCTGATGCACACTCAATTGTAATGATTGCAAAGATACTGGAGATGAATGGTTTGAGAGACGAAATGATGGAATTGAAACATCGTATTGACGGAGTGTCGGCTACTTATGTTGGTCACTATCGTCAGTTTTATGATAGTTTGTTAAGCCTGCACTTCAAATTTAATGACATTGATGCTGCTGCTAAGCTTGTTTTGGATATGAATAGCTCACATTATTGTCATATTAATGGAGTAGATAGGAAAGACTTGCAAAAGCTTTGCTTTATTGCAATCGGATCGCACAACCTTAAGAATGGATCGAAGATACACGTTCATCCGGAGCTGCTGCAGAAGGATTCTGTCCTTAAAGTGGAAGAAGGTAGAGAAGATCTAATATTTTATAGGTGTGGGAAACTTGTCCTCAGTAACAGAGCTCTGGCTAAGTTCATCAGTGGTTACAAGGAGGAGGGTAGGATTAGTGAACTTTCCAAACTTTTAGTTGGCATCCGAGGTGAACTATATTCAGTAGCAGGATCCAGCTTGTGTTCTGATGTGATTGGTGCTTGCATTCGGTTGGGCTGGCTTGAATCTGCTCATGACATTTTGGATGATGTAGAAGCTACTGGGTCTCCTTTGGGCCGGGACACATATGTGTTACTCTTGTCAGCGTATCGCAAGGGGAGGATGCAAAGAGAAGCAAATGCCCTGCTCAGACAAATGAAAAAGGTTGGTTTGGATTTCGACGAAGAATTATTGGATAATTGTATTAATCAACACATACTTTGCGTAGAGACATCAAATCCACTTGGTAAATCAGATTTGGCTGCTGCCTTGGCTCAACTATTGCAAGACGGAGATCGGAAAGTTTTTCCTTTGGTGTATGAGTTCAATTCCTCTATCTTCTTTTTCTGCAAGGCAGGAATGATAGAGGATGCACTGAAGGCATATAGAAGAATGTACGAAATGAAAATTCAACCCACATATCAAACTTTTGCTTTTCTGCTACGTGGATATTCATCTCTCGCTATGTATCGTGAGATCACATACTTGTGGGGAGACATTAAGAGATTCATGAGGAACAGCAGTTTAGTGGCGCATAGGGATCTTTACGAGTTATTGCTGATGAACTTTCTTCGAGGCGGTTACTTTGAGAGAGTAATGGAGGTCATTGGCCATATGAAAGACCATAACATGTATAATGATAAGTGTATTTACAAAAATGAGTTCTTAAGACTTCATAAGAATCTTTACAGGAGTTTAAAAACATCGGATAATAGAACAGAAGCACAAACCAAGAGGCTGGATCATATTCTGGAGTTTAAGAAATGGGTGGCTATTGATTAA 1962 0.3904 MHKKISTFDSNHCERLSWERSTQDILLGKIRFSLRNHQVNEAWECFHDYRKLYGYPEVHLVNQLIVQLSYSYDRVWMRRACDLVLQIVEQKPGFLNADTLVKLALSLARLQMPGPASAILRLLLKKGCVPPMNLLSLIVLHLVKTEIGTCLASNFLTQLCDFYNTLNDKKSHHVVMVKPDTLIFNLVLDACVRFKLSLKGLVLVELMPLTETVADAHSIVMIAKILEMNGLRDEMMELKHRIDGVSATYVGHYRQFYDSLLSLHFKFNDIDAAAKLVLDMNSSHYCHINGVDRKDLQKLCFIAIGSHNLKNGSKIHVHPELLQKDSVLKVEEGREDLIFYRCGKLVLSNRALAKFISGYKEEGRISELSKLLVGIRGELYSVAGSSLCSDVIGACIRLGWLESAHDILDDVEATGSPLGRDTYVLLLSAYRKGRMQREANALLRQMKKVGLDFDEELLDNCINQHILCVETSNPLGKSDLAAALAQLLQDGDRKVFPLVYEFNSSIFFFCKAGMIEDALKAYRRMYEMKIQPTYQTFAFLLRGYSSLAMYREITYLWGDIKRFMRNSSLVAHRDLYELLLMNFLRGGYFERVMEVIGHMKDHNMYNDKCIYKNEFLRLHKNLYRSLKTSDNRTEAQTKRLDHILEFKKWVAID 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0857 653 Coils Coil 228 248 - -
Lal15g0857 653 Gene3D Tetratricopeptide repeat domain 341 467 IPR011990 GO:0005515
Lal15g0857 653 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 498 532 IPR002885 -
Lal15g0857 653 PANTHER BNAC05G43320D PROTEIN 7 653 - -
Lal15g0857 653 Pfam PPR repeat 509 528 IPR002885 -
Lal15g0857 653 Gene3D Tetratricopeptide repeat domain 25 300 IPR011990 GO:0005515
Lal15g0857 653 Gene3D Tetratricopeptide repeat domain 468 650 IPR011990 GO:0005515
Lal15g0857 653 PANTHER OS07G0495300 PROTEIN 7 653 - -
Lal15g0857 653 TIGRFAM PPR: pentatricopeptide repeat domain 509 533 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0857 Lal-Chr15 6426667 6428628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0857 146 645 Glycosyltransferase AT1G05670 19.818 3.96e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0857 - - gmx:100812849 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0857 15 6426667 6428628 Lal15g0857 15 6426667 6428628 ECH