Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0828 ATGGCACTAAGAATGTGGGCTTCTTCCACTGCCAATGCACTCAAAATCTCTTCTGCCTCTAGAACTCATCTCTCATATCCCTCTTCTCTTTCCAGATGCTTCTCCACTGTCTTGGATGGACTCAAATATGCAACTTCACATGAATGGGTGAAGCATGAAGGAACAGTGGCTACTATTGGTATCTCTGACCATGCCCAGGGTCATCTAGGAGAGGTTGTGTTTGTGGATCTTCCAGAACCAAATGGAAAAGCTACAAAGGGTAGCAGCTTTGGAGCAGTGGAAAGTGTTAAAGCAACAAGTGATATCTATTCTCCAATCTCAGGAGAGATTGTTGAGGTTAACTCAAAGCTCACTGAAACTCCTGGCCTGATCAACACAAGCCCATATGAAGATGGATGGTTGATCAAAATAAAGCCAAGTAATCCATCTGAACTAGATTCCTTGTTGGGTTCAAAGGAGTACACAAAACATTGTGAAGAAGAAGATGCTTCACATTAA 498 0.4257 MALRMWASSTANALKISSASRTHLSYPSSLSRCFSTVLDGLKYATSHEWVKHEGTVATIGISDHAQGHLGEVVFVDLPEPNGKATKGSSFGAVESVKATSDIYSPISGEIVEVNSKLTETPGLINTSPYEDGWLIKIKPSNPSELDSLLGSKEYTKHCEEEDASH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0828 165 Hamap Glycine cleavage system H protein [gcvH]. 38 159 IPR002930 GO:0005960|GO:0019464
Lal15g0828 165 SUPERFAMILY Single hybrid motif 37 160 IPR011053 -
Lal15g0828 165 ProSiteProfiles Biotinyl/lipoyl domain profile. 56 138 IPR000089 -
Lal15g0828 165 Pfam Glycine cleavage H-protein 41 160 IPR033753 -
Lal15g0828 165 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 165 - -
Lal15g0828 165 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 165 IPR002930 GO:0005960|GO:0019464
Lal15g0828 165 TIGRFAM gcvH: glycine cleavage system H protein 39 162 IPR017453 GO:0005960|GO:0019464
Lal15g0828 165 CDD GCS_H 43 137 IPR033753 -
Lal15g0828 165 Gene3D - 29 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0828 Lal-Chr15 6130339 6131906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0828 K02437 - tcc:18606077 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0853 16 5550768 5552215 Lal15g0828 15 6130339 6131906 LSH