Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0797 ATGAAGTCTCAGGGATCCATTTTGATGAAGCTTGTGCTTCTTCAGTACATGTCAGTTCTTTGTTTTTCACAGGATTTTGATTTCTTCTACTTTGTTCTGCAGTGGCCAGGATCTTACTGTGACACACAGCAAAGTTGTTGTTACCCAACAACTGGAAAGCCTTCTGCAGATTTTGGCATTCATGGGCTTTGGCCTAATTACAAAGATGGCTCTTACCCTTCTAATTGTGATCCTAACAACAGTTTTCAGCGATCTCAGATATCAGACCTCATCAGCAGCTTACAGAGGAATTGGCCCACACTAGCATGCCCAAGTGGCAATGGGATACAATTTTGGACCCATGAATGGGAGAAACATGGAACATGTTCAGAATCAGTCCTAAGTAGCCAACATGATTATTTTGAAGCAGCTCTTAACCTTAAACAAAGAGCAAACCTCCTACAAGCTCTTACAAGTGCAGGAATACAACCTGATGGGGGGTCTTATAGCCTTAGCAGCATTAACGCAGCAATAAAAGGTGCTATTGGGTACACTCCATTTATTCAGTGCAATGTGGATTCAACAAGAAACAGCCAACTTTACCAAGTTTACTTGTGTGTCAACACCAATGGATCAGACTTCATTCAGTGTCCTGTATTCCCTAGTGGCAAATGTGGATCAGAAATTGAGTTTCCATCTTTCTAA 684 0.4152 MKSQGSILMKLVLLQYMSVLCFSQDFDFFYFVLQWPGSYCDTQQSCCYPTTGKPSADFGIHGLWPNYKDGSYPSNCDPNNSFQRSQISDLISSLQRNWPTLACPSGNGIQFWTHEWEKHGTCSESVLSSQHDYFEAALNLKQRANLLQALTSAGIQPDGGSYSLSSINAAIKGAIGYTPFIQCNVDSTRNSQLYQVYLCVNTNGSDFIQCPVFPSGKCGSEIEFPSF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0797 227 PANTHER RIBONUCLEASE T2 5 227 IPR001568 GO:0003723|GO:0033897
Lal15g0797 227 SUPERFAMILY Ribonuclease Rh-like 21 226 IPR036430 GO:0003723|GO:0033897
Lal15g0797 227 CDD RNase_T2_euk 26 224 IPR033697 -
Lal15g0797 227 Pfam Ribonuclease T2 family 26 210 IPR001568 GO:0003723|GO:0033897
Lal15g0797 227 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Lal15g0797 227 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Lal15g0797 227 Gene3D - 20 227 IPR036430 GO:0003723|GO:0033897
Lal15g0797 227 PANTHER F7A19.32 PROTEIN 5 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0797 Lal-Chr15 5818530 5819976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0797 K01166 - gmx:100305644 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0797 15 5818530 5819976 Lal15g0797 15 5818530 5819976 ECH