Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0731 ATGGACCCTCCCAATTTGAAGAAATACGGTGTTCCTATCTACTCCCTTGCTTGGATTCCCCAAAACCTCATCAAATCGCGCCTTAACCAAACCGTTGATGATTCCTCCGACTCTGATCACAACTCTCCGACGGAGACGAAGGCGGAGGAGGAGACAGTAACCGAGGAACTCACCGCCGGGAGCTACCTGGTGTTTGCCGGCGGTGGTGGAGAAGGCCATAGCGGTATTCCTAATTCTTTGTTGATCGCGCACTTCGATGTTGCATCCAATTCTCTTTCTAATCAACCGGTGGGTAAGCTAGGAACTAATTCTGAGTTGCCTTATAGAATGGCACTTCACCCCAATGGAGACGGCCTTATTTGTGCCATGATGCCAAAGAGTTGCAGATGGTTTGACTGGGACCACAACAAGGTTTCTGAAAATCTTAATTTGGACCTGAAGAAGTCGGAGATAGTCCTTACTGGGTTGGAGGATGTTGAACTGCAACTAGCATTAGCATTCAACAATGATGGTACTGCACTAGCTGCGGGAGGGGAGGATGGCAATCTAAGGGTTTTCAAGTGGCCTAGTATGGAAATTATTCTCAACGAGTCTAATGCTCATTCTACTGTGAAGGACTTACATTTCAGTTCTGATGATAAATTGCTTGTCTCTTTGGGAGGTGCTGGCCCCAGCAGGGTTTGGGATATTTCTTCATCAAAACTCTTAACCGCTCTATCGAATGAAAATCGCGATAATTTTAGCTGCTGCAGATTTTCTCAAATAAATGATAGGGCTCAGGTCCTATATATTGCTGATAATGGTGGAAACATTCTGACCTGGAATACGCAAACGTGGAAAAGAATAAATTCAAAGCGTATTATTCGTGATGCAATCTCTGCATTGAATGTCTCAGCTGATGGAAAATTTCTTGCGTGCGGAACACCTTCTGGGGACATTATAACTGTAAGTTCAAAAAATATGCAGATTCAGACAATTATAAAAAAGGCTCACCTTGGCATAGTAACTGCCTTAGCATTCTCCCCTGATTCAAGGGCCTTGGCTTCTGTATCCATGGATTCAAGTGCGAGGGTAACACTAATTGAGGAGAAGAAGAAAAATGGGGGATTGAGCTTGTTGATTGCATTATTTATCCTTCTCCTCGCAGTAGCTGTTTACTTCCAGAAAGTTAGAGGAATTGAAAATTAA 1188 0.4377 MDPPNLKKYGVPIYSLAWIPQNLIKSRLNQTVDDSSDSDHNSPTETKAEEETVTEELTAGSYLVFAGGGGEGHSGIPNSLLIAHFDVASNSLSNQPVGKLGTNSELPYRMALHPNGDGLICAMMPKSCRWFDWDHNKVSENLNLDLKKSEIVLTGLEDVELQLALAFNNDGTALAAGGEDGNLRVFKWPSMEIILNESNAHSTVKDLHFSSDDKLLVSLGGAGPSRVWDISSSKLLTALSNENRDNFSCCRFSQINDRAQVLYIADNGGNILTWNTQTWKRINSKRIIRDAISALNVSADGKFLACGTPSGDIITVSSKNMQIQTIIKKAHLGIVTALAFSPDSRALASVSMDSSARVTLIEEKKKNGGLSLLIALFILLLAVAVYFQKVRGIEN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0731 395 ProSiteProfiles Trp-Asp (WD) repeats profile. 197 238 IPR001680 GO:0005515
Lal15g0731 395 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 60 358 IPR011047 -
Lal15g0731 395 MobiDBLite consensus disorder prediction 32 54 - -
Lal15g0731 395 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 3 392 IPR045260 GO:0005085
Lal15g0731 395 PANTHER SEC12P-LIKE 2 PROTEIN-RELATED 3 392 - -
Lal15g0731 395 MobiDBLite consensus disorder prediction 30 54 - -
Lal15g0731 395 Gene3D - 56 366 IPR015943 GO:0005515
Lal15g0731 395 ProSiteProfiles Trp-Asp (WD) repeats profile. 328 358 IPR001680 GO:0005515
Lal15g0731 395 Pfam WD domain, G-beta repeat 164 186 IPR001680 GO:0005515
Lal15g0731 395 Pfam WD domain, G-beta repeat 329 358 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 146 187 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 278 317 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 319 360 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 232 275 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 191 229 IPR001680 GO:0005515
Lal15g0731 395 SMART WD40_4 93 132 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0731 Lal-Chr15 5133170 5141626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0731 K14003 - gmx:100786727 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0731 15 5133170 5141626 Lal15g0731 15 5133170 5141626 ECH