Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0565 ATGAAGGTACAGAAGTCATATTTCTCGGTTGTTGTTGATCTTTCCTTTGCACCACAAAAGACAAAACATCACTCGCCAGGATCACATCTCTCAAGATGGTGTCCCCAAAACCTCACTGCCACTTCAATCTCTTCATCTTCCTCTGTTTTCTTCGCTCCTTCTACCTTCAATTATAGGAGCCAGGTGTCATTGCCAGTGAAAAGCGTTGGAATTTTAAAATGTGTTGCGGCACCCCAAGAAGCTGAGACTGCTTACAAAACAAAGGTCTCTCGCAATGAAAATATTACTAAACTTCAAGCTGGCTATCTCTTTCCAGAGATTGCTAGAAGGAAGAATGCACACTTGCTGAAGTTTCCTGATGCAAAAATAATAAGCCTCGGAATTGGTGATACTACAGAACCCATTCCTGAAGTCATAACTTCTGCAATGGCAAAGAAATCGTATGCATTGTCAACCTTGGAAGGATATAGTGGTTATGGAGCTGAGCAAGGTGAAAAGCCATTAAGAAGCGCAATTGTTTCAACATATTACAAGGATCTTGGCATAGACGATGACGATATATTTGTATCAGATGGAGCAAAATGTGATATATCTCGCCTTCAGGTTGTCTTCGGATCAAATGTAAAAATGGCTGTCCAAGACCCATCATACCCGGCCTACGTAGACTCAAGTGTGATTATGGGCCAGACTGGCTTCTATCAAAAGGATGTTCAGAAGTTTGCAAACATCGAGTACATGAAGTGTAAACCTGAAAATGGTTTCTTCCCTGATTTGTCTTCTATTTCTCGACCAGATATAATTTTTTTCTGTTCGCCGAACAATCCTACTGGTGCTGCTGCAACGAGGGAGCAACTGACCCAACTAGTTCAGTTTGCTAAGGACAACGGGTCTATAATTGTCTACGATTCAGCATATGCAATGTACATTTCTGGTGACAATCCACGCTCCATCTTTGAAATTCCTGGAGCCAAAGAGGTTGCCCTTGAGACTGCGTCATTTAGCAAGTATGCTGGCTTCACTGGAGTTCGATTGGGTTGGACTGTGATTCCAAAGCAGTTGCTGTTTTCTGATGGATTTCCTGTTGCCAAAGACTTCAATCGTATTGTATCTACTTGCTTCAATGGCGCATCGAATATTTCCCAGGCCGGTGGTTTGGCTTGCCTTTCACCAGAAGGTCTTAAGGCTATGCGAGATGTTATTGGATTCTACAAGGAAAATACTGACATAATAGTGGAAACATTTGATTCACTTGGTTTCAAAGTCTATGGAGGGGAAAATGCACCATATGTGTGGGTCTATTTCCCGGGTCGAAGCTCATGGGATGTATTCGGTGAGATTCTTGAAAAGACTCATGTGGTTACAACTCCCGGTAGTGGTTTTGGACCTGCTGGGGAAGGTTTTATCAGGGTTAGTGCCTTTGGTCACAGAGAAAATGTCTTGGAGGCATGCAGAAGATTCAAGCAGCTATACAAGTGA 1476 0.4268 MKVQKSYFSVVVDLSFAPQKTKHHSPGSHLSRWCPQNLTATSISSSSSVFFAPSTFNYRSQVSLPVKSVGILKCVAAPQEAETAYKTKVSRNENITKLQAGYLFPEIARRKNAHLLKFPDAKIISLGIGDTTEPIPEVITSAMAKKSYALSTLEGYSGYGAEQGEKPLRSAIVSTYYKDLGIDDDDIFVSDGAKCDISRLQVVFGSNVKMAVQDPSYPAYVDSSVIMGQTGFYQKDVQKFANIEYMKCKPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVQFAKDNGSIIVYDSAYAMYISGDNPRSIFEIPGAKEVALETASFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDFNRIVSTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTDIIVETFDSLGFKVYGGENAPYVWVYFPGRSSWDVFGEILEKTHVVTTPGSGFGPAGEGFIRVSAFGHRENVLEACRRFKQLYK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0565 491 Gene3D - 133 390 IPR015421 GO:0003824
Lal15g0565 491 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 41 491 - -
Lal15g0565 491 SUPERFAMILY PLP-dependent transferases 90 487 IPR015424 -
Lal15g0565 491 Hamap LL-diaminopimelate aminotransferase [dapL]. 90 489 IPR019942 GO:0008483
Lal15g0565 491 PANTHER AMINOTRANSFERASE 41 491 IPR019942 GO:0008483
Lal15g0565 491 Gene3D Aspartate Aminotransferase, domain 1 103 487 IPR015422 GO:0003824
Lal15g0565 491 CDD AAT_like 124 488 - -
Lal15g0565 491 Pfam Aminotransferase class I and II 122 486 IPR004839 GO:0009058|GO:0030170
Lal15g0565 491 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 90 488 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0565 Lal-Chr15 3910136 3916103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0565 K10206 - gmx:100801405 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0565 15 3910136 3916103 Lal15g0565 15 3910136 3916103 ECH