Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0494 ATGGGTAAGCTTAAGCTCCATTTTTTGTTGGGTTTCACTCTCTTGCTTCTACTTGAAAGTGCTTCAGCTGCACCATTACCTACTTCACCTGCAAAGATTGTTACTGGGTTTCTCTCAAACTCTGTGCCTTCTATCACCAAATGGGTTTGGTCTCTCAAAGCCACCACCAAAACTGCTGTTTCTGGGAAGTCGATGATGAAGTTTGAGAGTGGTTACAATGTGGAAACAGTGTTTGATGGAAGCAAGCTTGGAATTGAACCTTATGCGGTTGAGTTGTTGCACAATGGGGAGCTTCTGATTCTGGATTCGGCTAATAGTAACATTTATAGGATCTCATCCTCACTTTCTTTATATAGCAGACCGAAACTGGTGACTGGGTCTTCTGAAGGATATTATGGGCATGTTGATGGGAAGCTGAGGGAGGCTAGGATGAACCATCCAAAGGGAATAACAGTTGATGACAGAGGAAATGTCTATGTTGCAGATACTATGAATATGGCAATTAGGAAAATAAGCGACGCAGGGGTCACAACAATTGCTGGAGGAAAATTGAATCGTGGCTGGGGCCATGTTGACGGACCAAGTGAAGAAGCTAAATTTTCTAATGATTTTGATGTGGTTTATGTTGGAAGCAGTTGTTCCCTACTTGTCATAGACAGAGGAAACCAAGCCATCAGGGAGATACAACTCCACTTTGATGACTGTGCTTATCAATATGGAAGTGGATTCCCTCTAGGAATCACAATGCTTGTTTTGGCTGGCTTCTTCGGTTATATGCTGGCATTGTTGCAGCGTAGACTTAGTACAATTGTAGCATCTCAGGATGCTCAGGGTCGAGAAATGTCTGATATTTCCCCAAGTCCATATCAAAAGCCCTCAAAATCTTACAGGCCTCCTTTAATTCCAACAGAAGATGAACCTGATAAGCAAGAAGAAGGTCTCTTTGGATCTATTGGGAAGCTTCTTGCCAATGCCGGGGCATCAGTGGTTGAGATAATGGGAGGGTTATTTCCTGGTTTCAGAAGTAAACCACAGAGCTACCAGTTTCAAAGTCAACCGCTGTTCCAAGAACCTCAAAAGCAAGTGAAAGCTTGGCCTATCCAAGAAAGTTTTGTGATTCAAGATGAAGATGAGCCACCCCCTTCTATTGACACAAGAACCCCAACCACACATAAAACATATCCTTTCATGTCCAAGGATGCAGAAAAAATGCAACAGTTGTGGCAAAGTCGAGCATTTTATAGCGGGTGGGATGGAAATCTTCAGCAGCAGCAGCAGCAACAACAACAAAAACATCACCATCGCCATCAGTACCATTCATCGGTACCTCACACTTACTATGAACAAAGCCATGAAGCAACCAATGAGATATTGTTTGGGGCAGTGCAAGAGCAGGATGGGAAGCAGGAAACTATGGTTATCAAGCCTGTGAACTATGGTGATTCTCTCTATGATCATCACAATATTCGTTCGCGAACCAGTTCCTCGGGCTACATCTACAAGTACTGA 1509 0.4334 MGKLKLHFLLGFTLLLLLESASAAPLPTSPAKIVTGFLSNSVPSITKWVWSLKATTKTAVSGKSMMKFESGYNVETVFDGSKLGIEPYAVELLHNGELLILDSANSNIYRISSSLSLYSRPKLVTGSSEGYYGHVDGKLREARMNHPKGITVDDRGNVYVADTMNMAIRKISDAGVTTIAGGKLNRGWGHVDGPSEEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHFDDCAYQYGSGFPLGITMLVLAGFFGYMLALLQRRLSTIVASQDAQGREMSDISPSPYQKPSKSYRPPLIPTEDEPDKQEEGLFGSIGKLLANAGASVVEIMGGLFPGFRSKPQSYQFQSQPLFQEPQKQVKAWPIQESFVIQDEDEPPPSIDTRTPTTHKTYPFMSKDAEKMQQLWQSRAFYSGWDGNLQQQQQQQQQKHHHRHQYHSSVPHTYYEQSHEATNEILFGAVQEQDGKQETMVIKPVNYGDSLYDHHNIRSRTSSSGYIYKY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0494 502 MobiDBLite consensus disorder prediction 420 441 - -
Lal15g0494 502 MobiDBLite consensus disorder prediction 277 310 - -
Lal15g0494 502 PANTHER - 2 502 - -
Lal15g0494 502 MobiDBLite consensus disorder prediction 277 291 - -
Lal15g0494 502 Pfam NHL repeat 145 170 IPR001258 GO:0005515
Lal15g0494 502 Gene3D - 37 229 IPR011042 -
Lal15g0494 502 PANTHER NHL REPEAT PROTEIN 2 502 - -
Lal15g0494 502 SUPERFAMILY NHL repeat 71 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0494 Lal-Chr15 3403768 3407776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0494 - - gmx:100799483 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0494 15 3403768 3407776 Lal15g0494 15 3403768 3407776 ECH
Lal15g0494 15 3403768 3407776 Lal23g1047 23 12227584 12232459 LSH