Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0478 ATGGACCCAATTGAACAATTCGAAGAATGGAAGGAACAAGCTTCTCACTTGTGGCATGTAGCTATGGATCATCTTCGTCATGTTCCCCCAACTCAGCTATACGCCGCTGCCGCTATCGTGGTTTTCACAACCGTGCTTTTGCTCTCAAGGTTGTTGAAGCGTGTAAAGGGTAATACCATTGTGTTGACGGGGCTTAGCGGGAGTGGAAAATCTGTTCTCTTCTATCAACTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCTAACGAGGGTACTTTTGTTCTTCATGGTGAAACAACAAAGAAGGGCAAGATAAAACCTGTTCATATTGTTGATGTTCCTGGACATTCTCGTCTTAGACCTAAACTGGACGAATACTTACCTCAAGCAGCTGGCGCAGTCTTTGTGGTTGATGCTTTAGACTTCTTACCAAACTGTCGTGCGGCTTCAGAGTACCTCTATGATCTATTAACTAAGGGAAGTATTGTGAAGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCATACCAAGGAGTTTATCCGCAGACAGATGGAGAAGGAAATCGACAAATTAAGGACATCGAGAAGTGCAATATCAGAAGCTGACGTTACAAATGAGTTTACCCTGGGGGTACCTGGAGAGCCCTTTACTTTTACTCAGTGCTCTAACAAAGTTACAACTGCAGAAGCTTCTGGATTAACTGGGGAGATATCTCAGTTGGAAGAGTTTATCAGAGAACATGTAAAGCCATAG 786 0.4338 MDPIEQFEEWKEQASHLWHVAMDHLRHVPPTQLYAAAAIVVFTTVLLLSRLLKRVKGNTIVLTGLSGSGKSVLFYQLRDGSTHQGTVTSMEPNEGTFVLHGETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGAVFVVDALDFLPNCRAASEYLYDLLTKGSIVKKKIPLLILCNKTDKVTAHTKEFIRRQMEKEIDKLRTSRSAISEADVTNEFTLGVPGEPFTFTQCSNKVTTAEASGLTGEISQLEEFIREHVKP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0478 261 Coils Coil 192 212 - -
Lal15g0478 261 PANTHER TRANSFERRIN 19 261 - -
Lal15g0478 261 Gene3D - 52 259 IPR027417 -
Lal15g0478 261 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 19 261 IPR019009 -
Lal15g0478 261 ProSiteProfiles small GTPase Arf family profile. 51 255 - -
Lal15g0478 261 CDD SR_beta 58 257 IPR019009 -
Lal15g0478 261 Pfam Signal recognition particle receptor beta subunit 58 236 IPR019009 -
Lal15g0478 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 247 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0478 Lal-Chr15 3274393 3279815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0478 4 261 Miscellaneous Gene Families AT5G05670 69.615 2.93e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0478 K12272 - gmx:100800572 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0478 15 3274393 3279815 Lal15g0478 15 3274393 3279815 ECH