Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0477 ATGGCCCGTAAGAAGATCAGAGAGTATGACTCCAAGAGATTGGTGAAGGAGCATTATAAGAGACTTTCTGGCAATGACTTGCCGATCAAATCTGCACAAGTCTTCCTTTGTCGGTGTGTTCCAGATAGGGAAGGTGGTTCAATGATTAATGAACCAACCCGAGTACCTTGGTCTGGTCATGTTACAGAGTCGACTGATTTCACTGAGCTACAAGAAAAGGAACCCTGGCTTTCATCTTCTAAATTGGTCGTGAAACCTGACATGTTATTTGGAAAGCGTGGCAAAAGCGGTTTGGTTGCTTTAAACTTGGATTTGGCACAAGTTGCTTCATTTGTGAAAGAGCGTCTGGGAAAAGAGGTTGAAATGAGTGGATGCAAAGGACCCATAACAACTTTCATTGTTGAACCTTTCATCCCACACAATGAAGAGTTTTACCTGAACATTGTCTCCGAGAGACTTGGGAACAGCATAAGCTTTTCAGAATGTGGAGGAATTGAAATTGAAGAGAACTGGGATAAGGTTAAGAGTGTATTTGTTCCAACGGGAGTGTCTCTCACATCAGAAACTATTGCCCCACTTGTTGCAACCCTTCCCTTGGAGATCAAGGGAGAAATTGAGGAGTTTGTCAAGGTGATTTTCAATCTATTTCAAGACCTGGATTTCAGTTTCTTAGAGATGAATCCTTTCACTTTGGTCGATGGAAAGCCTTATCCTTTGGATATGAGGGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAGAAATGGGGAAACATTGAATTTCCATTGCCATTTGGAAGGGTTATGAGTCCCACCGAGTCTTTCATTCATGGATTAGATGAAAAGATCTTGATCCTTTTAGGTATTTCGAATCTTAGTATTGTAATATTAGGACGTGGTCTGCATATCTTCGAGACAAGCGCATCCTTAAAATTTACGGTGTTGAACCCAAAGGGCCGAATTTGGACAATGGTCGCTGGGGGAGGTGCTAGCGTCATCTATGCTGACACGGTAGGTGATCTTGGCTTTGCAAATGAACTTGGAAACTATGCAGAGTACAGTGGTGCACCTAAAGAAGATGAGGTCCTACAGTATGCCAGAGTTGTTATTGATTGTGCAACTGCAAATCCTGATGGCCAGACGAGAGCTCTTGTGATAGGAGGAGGCATAGCTAACTTTACTGATGTTGCTGCTACATTTAGCGGCATAATTCGGGCACTGAAGGAGAAGGAGTCCAAGTTAAAAGCAGCAAGGATGCACATTTATGTGAGGAGAGGAGGTCCTAACTACCAAAAGGGTCTAGCAAAAATGCGAGAACTTGGAGAAGAGATTGGCATCCCCATTGAGGTTTATGGACCTGAAGCAACAATGACTGGTATATGCAAAGAAGCAATACAGTGCATCACTGCTTCCGCTTAA 1422 0.4318 MARKKIREYDSKRLVKEHYKRLSGNDLPIKSAQVFLCRCVPDREGGSMINEPTRVPWSGHVTESTDFTELQEKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGKEVEMSGCKGPITTFIVEPFIPHNEEFYLNIVSERLGNSISFSECGGIEIEENWDKVKSVFVPTGVSLTSETIAPLVATLPLEIKGEIEEFVKVIFNLFQDLDFSFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVMSPTESFIHGLDEKILILLGISNLSIVILGRGLHIFETSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGFANELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQTRALVIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIYVRRGGPNYQKGLAKMRELGEEIGIPIEVYGPEATMTGICKEAIQCITASA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0477 473 Pfam ATP-grasp domain 67 230 IPR013650 -
Lal15g0477 473 Gene3D - 305 472 IPR016102 -
Lal15g0477 473 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 64 263 - -
Lal15g0477 473 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 306 473 - -
Lal15g0477 473 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 1 286 - -
Lal15g0477 473 Pfam ATP citrate lyase citrate-binding 307 467 IPR032263 -
Lal15g0477 473 SUPERFAMILY Succinyl-CoA synthetase domains 305 453 IPR016102 -
Lal15g0477 473 Gene3D - 1 260 - -
Lal15g0477 473 PANTHER ATP-CITRATE SYNTHASE 306 473 - -
Lal15g0477 473 PANTHER ATP-CITRATE SYNTHASE 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0477 Lal-Chr15 3267964 3272815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0477 1 473 Acyl Lipid Metabolism Gene Families AT1G10670 79.493 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0477 K01648 - gmx:100818180 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0477 15 3267964 3272815 Lal15g0477 15 3267964 3272815 ECH