Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0436 ATGATAATGGAGCTTGGGTATCAGAATCACTATCACCTTTATAAAAGATCAACACTTGTTACTATTTTCCTACTACCATTCTTTTTCACCTTCACCCACGTTTTCTCTTCTTCTATCTACCCAGAATCAATTGGCTTGGTTTGGTTGGTCAACCTTGTCTTTATGAGGGAATTTATGGAATTGAATCCTATAAAACCCCGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGTGAAACTCCAACATCACAGCTCTCTGAGCTGTGGTCACCTCTGGAAAACCAAGGATGGAAACCTTGTGTCGAATCTAAAAATCCAACATTACCAGAAAAGTCTGAGGGATACATCCAGATCTTTCTTGATGGTGGTTTGAACCAGCAAAGGATGGGGATCTGTGATGCAGTCGCTGTTGCAAAGATACTGAATGCAACACTTGTGATCCCATACCTTGAATTAAATCCCGTTTGGAAAGATTCCAGCTCCTTCATGGATATATTTGATGTTGATCACTTCATTGATGTATTAAAGGATGATATTTCTGTAGTTAAAGAGCTGCCTGAAGATTACTCCTGGAGCACCAGAGAGTACTATTCCACTGCTATTCGAGAAACCAGAATCAAGGCTGCACCTGTGCATGCAACAGCCCACTGGTATCTGGAAAATGTTTTGCCTGTCCTGCAGAGTTATGGCCTTGCCGCAATCTCTCCATTTTCTCACCGTCTATCTTTTGACAATGTGCCTGTGGAAATCCAGCACTTACGCTCTAAAGTCAACTTTGAAGCTTTGATCTTTGTTCCTCACATCAGAACACTTGGAGATGCTCTTATTAGCCGCCTTCGCTATCCTCAAGGCTCTGCAGAAGAAATGGACAGCAACTACCTGCAAGAGGTTATTGATGCAGGTGATAAAAAGAAGCCGGGAAGGTTTGTTGTACTACACCTTCGGTTTGATAAGGATATGGCAGCCCATTCAGCCTGTGATTTCGGCGGGGGAAAAGCTGAAAAGTTGGCACTTGCGAAGTATAGACAGGTGATTTGGCAGGGAAGGGTTCTTAATTCCCAATTCACCGATGAAGAGTTGAGGAGTCAGGGCCGTTGCCCAATGACTCCTGAAGAAATTGGATTGTTGCTAGCGGCTTTGGGATTTGACAACAGCACTCGTTTGTATCTTGCCTCTCACAAGGTCTATGGCGGAGAAGCAAGGATTTCAACTTTGAGGCAATTATTTCCTCTAATGGAAGACAAGAAGAGCCTTACTTCGCCTTTAGAGCGCTCTCTGATAAAGGGAAAGGCTTCTGTATTAGCTGCAGTTGATTACTATGTTGGCATGCATAGTGACATCTTCATCTCTGCTTCCCCAGGAAACATGCACAATGCAATGGTTGGACACAGAACTTACTTGAACTTAAAGACTATAAGGCCAAACATGCAATTGATGGGTCAACTTTTCTTGGATAAAGCCATTGAGTGGAAAGAGTTCCAACAAGCAGTAGTTGAAGGTCATCAAAATAGACAAGGTCAACTTAGGCTCAGAAAGCCAAAACAGTCCATATACACTTATCCTGTTCCTGATTGCATGTGCCAAGCTTAA 1590 0.4321 MIMELGYQNHYHLYKRSTLVTIFLLPFFFTFTHVFSSSIYPESIGLVWLVNLVFMREFMELNPIKPRHSRLLRSAVQRETPTSQLSELWSPLENQGWKPCVESKNPTLPEKSEGYIQIFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWKDSSSFMDIFDVDHFIDVLKDDISVVKELPEDYSWSTREYYSTAIRETRIKAAPVHATAHWYLENVLPVLQSYGLAAISPFSHRLSFDNVPVEIQHLRSKVNFEALIFVPHIRTLGDALISRLRYPQGSAEEMDSNYLQEVIDAGDKKKPGRFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEIGLLLAALGFDNSTRLYLASHKVYGGEARISTLRQLFPLMEDKKSLTSPLERSLIKGKASVLAAVDYYVGMHSDIFISASPGNMHNAMVGHRTYLNLKTIRPNMQLMGQLFLDKAIEWKEFQQAVVEGHQNRQGQLRLRKPKQSIYTYPVPDCMCQA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0436 529 PIRSF UCP009360 6 529 IPR024709 -
Lal15g0436 529 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 53 528 - -
Lal15g0436 529 CDD O-FucT_plant 115 472 IPR024709 -
Lal15g0436 529 PANTHER O-FUCOSYLTRANSFERASE 39 53 528 - -
Lal15g0436 529 Pfam GDP-fucose protein O-fucosyltransferase 116 467 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0436 Lal-Chr15 2992446 2997195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0436 85 528 Miscellaneous Gene Families AT1G22460 33.691 3.31e-85 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0436 - - gmx:100817796 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0436 15 2992446 2997195 Lal15g0436 15 2992446 2997195 ECH