Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0337 ATGCTAAAAGCAGTTAGTACCTTTCCCCGTATCCCATCTCGTACTTTCACCAAATATATACTATCGAAACCCATCCAATTCAACAACATGAGCTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTGCCATCGCTCACATATCCAAAATTCGTTTCCATAGAAGGCGCCGATATACACTCCAGAACTAAACCAGATGGCTTCAGGTTCACTCTTGTCTCTTATAACATTTTGGCTCAGGCTTATGTGAAGAGTTGTTTCTTCCCGCACTCTCCTTCACCATCTCTTAAGTGGAAATTTCGTTCAAATGCTGTTTTACAAGTTCTCAGCAACTTGGCAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTATAAAGGAAAAATGCAGGAGCTAGGATATTCTTCTATTTATATGAAGAGAAGTGGACAGAGAAAACGTGATGGATGTGGTTTATTTTACAAGCATGACCGTGCTGAGTTGGTCTTAGAGGATAAAATCGAATACAATGATCTTGTAAAGTCAATTCCAGATGTGAACTCTCCAAATGATGATGGAAGCAGCAATATCCAGACAGTCCAGCCAGATAAACAAAAGGATGTTGCATCCAAAAGTGATAAACTGGTGGAACCAAAACTCTCTTTCTGCTACTTCATTTCTATTGCTTCTGTTCTCCCTGCTTTCGTTCACACACACATATATATATACTTCAGAGTGTGCCCTCTCTTCATTAATTGGTTTTCTGATCCAGGACCTAAATCAAATACAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGACTGTGTTGGAATTCTGGCTGCATTCAAACTCAAAGATCCCTCTCGTCATGTTGTTATTGTGGCCAACACACATCTTTATTGGGATCCTGAGCTTGCTGATGTCAAGCTTGCACAAGCTGAATATCTTCTATCTCGCTTGGAACAATTTAGAACACTGGTAGCAGATAGATACGAATGCATACCTGATGTCATTGTAGCTGGTGACTTCAATTCTCAGCCCGGAGATATGGTTTATCAGTACCTAACATCAGGCAACCCTTCCTCAAAGCAGGTGACTGAATGCTTAGAGGATCCTCATATTCCCTTATGTAGTGTCTATGCTTCTACTAGAGGAGAGCCGCCATTTACAAACTATACACCCGGCTTCACTGGAACACTGGATTATGTATTATTTTCCCCTTCTGACCACATTAAACCAATTAGCTTTCTCGAGCTTCCAGACTCTAATGATGCTGATATTGCTGGTGGACTACCAAACTACAGCCATCCAAGTGATCATCTTCCGATTGGTGCCGAATTTGAAATCATCAAGGAATAA 1365 0.4081 MLKAVSTFPRIPSRTFTKYILSKPIQFNNMSSFSSSSSSSSSVPSLTYPKFVSIEGADIHSRTKPDGFRFTLVSYNILAQAYVKSCFFPHSPSPSLKWKFRSNAVLQVLSNLAADFFCLQEVDEFDSFYKGKMQELGYSSIYMKRSGQRKRDGCGLFYKHDRAELVLEDKIEYNDLVKSIPDVNSPNDDGSSNIQTVQPDKQKDVASKSDKLVEPKLSFCYFISIASVLPAFVHTHIYIYFRVCPLFINWFSDPGPKSNTEDRGDPNDPRVRLKRDCVGILAAFKLKDPSRHVVIVANTHLYWDPELADVKLAQAEYLLSRLEQFRTLVADRYECIPDVIVAGDFNSQPGDMVYQYLTSGNPSSKQVTECLEDPHIPLCSVYASTRGEPPFTNYTPGFTGTLDYVLFSPSDHIKPISFLELPDSNDADIAGGLPNYSHPSDHLPIGAEFEIIKE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0337 454 Pfam Endonuclease/Exonuclease/phosphatase family 73 412 IPR005135 GO:0003824
Lal15g0337 454 MobiDBLite consensus disorder prediction 182 207 - -
Lal15g0337 454 MobiDBLite consensus disorder prediction 182 202 - -
Lal15g0337 454 PANTHER BNAC08G09040D PROTEIN 256 453 - -
Lal15g0337 454 PANTHER BNAC08G09040D PROTEIN 49 215 - -
Lal15g0337 454 SUPERFAMILY DNase I-like 69 451 IPR036691 -
Lal15g0337 454 Gene3D Endonuclease/exonuclease/phosphatase 49 454 IPR036691 -
Lal15g0337 454 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 49 215 - -
Lal15g0337 454 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 256 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0337 Lal-Chr15 2278324 2282269 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0337 K12603 - gmx:100775932 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0337 15 2278324 2282269 Lal15g0337 15 2278324 2282269 ECH