Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0320 ATGGTTCCCAAACCCATCATAGTAACAACACCACCTTCATCATCTCCACCTCTCCCTCTCCTCAATAACAAATCTTCATCATCATCTCTTAAAACTATTGAAAAACCCCACCAAAACCTTAAACCAACTACTACACCCACACAAACTAAACCAAACCAAAAATCATTGGTCATAAAAAGAACCTCATCACCACAAGTCTCAGTGTTTGGACTAATCTTCAACACATTTGATCACATAATTAACAACTTCATTGACCCTCCTATCAAACCCTCATTAGACCCAAAACACGTTCTATCCAATAACTTCGCCCCCGTCACTCATGAACTCCCTCCCACACAATGTGAAACCATTCACGGCACACTACCACCGTGTCTCGACGGCGCCTACATCAGAAACGGTCCTAACCCACAGTTTCTCCCTAAAGGACCGTACCATCTCTTTGACGGTGACGGAATGCTTCACTGCCTTAGAATCTCACAATCTAAAGCCACACTATGCAGTCGTTACGTCAAAACCTACAAATACAAAATAGAAAACGAAGCTGGTTACTCTCTTATCCCTAATGTATTCTCAGGGTTCAATTCTCTTGTTGCTGCAGCAGCACGTGGTTCTGTGACTGCAGCACGTGTGATTACGGGTCAATATAATCCTTCGAATGGGATTGGGTTAGCGAACACGAGTTTGGCTTTGTTTGGGAATAATCTCTTCGCGTTAGGGGAATCTGACCTTCCTTATAAGGTTAGAGTGACCTCTAATGGAGACATTGAAACCCTAAATCGCCATGATTTTGATGGGAAGCTTGGTATGAGTATGACTGCACATCCTAAGACTGATCCTGAAACGGGTGAAACGTTTGCGTTTCGTTATGGACCAGTGCCTCCGTTTCTGACTTACTTTTATTTTGATTCTGAAGGGAGAAAGAAACCTGATGTGCCAATATTCTCCATGAATAGACCTTCATTTCTTCATGACTTTGCCATTACTAAAAAATATGCTATCTTTGCAGACATTCAGATCGGAATGAACCCTCTTGATATGATTTCCGGTGGATCTCCGATCGGGTCGGATCCTTCTAAAATCACAAGGTTGGGATTCCTTCCACGCTATGCAACAGATGAGTCCAAAATCAAGTGGATCAACGTGCCGGGGTTCAACATAATCCACGCCATAAACGCATGGGAAGAAGATGATGGAAAAACAATAACTTTGGTAGCACCCAATATTCTCTCAGTAGAGCACACACTTGAGAGAATGGAACTCGTCCACGCCATGGTAGAGAAGGTAAAGATTAACCTCGACACTGGAATAGTTTCAAGACAACCTCTTTCTGCAAGAAACCTTGACTTTGGTGTAATAAACCAATCATATACCGGAAAAAAGAACCGATTCGTTTACGCCGCGATTGGGGATCCAATGCCGAAGATTTCCGGGGTGGTGAAGCTTGACGTGTCGAAAGGAGAGGTAGGGTGTAGAATGTACGGCGAGGGTTGTTACGGTGGTGAACCATTTTTTGTGGCTAAGGATGAGGGTGAAGAAGAAGATGATGGGTATTTGGTGTCTTATGTTCATGATGAGAAGAAAGGGGAATCGAAGTTTATAGTAATGGATGCGAAGTCGCCGGAGCTTGATGTTGTGGCGGCGGTGAAGCTTCCACGGAGGGTGCCTTACGGTTTTCATGGATTATTTGTGAGGGATAGTGACCTGAGAAGGGTATCGGTGTCATGA 1725 0.4388 MVPKPIIVTTPPSSSPPLPLLNNKSSSSSLKTIEKPHQNLKPTTTPTQTKPNQKSLVIKRTSSPQVSVFGLIFNTFDHIINNFIDPPIKPSLDPKHVLSNNFAPVTHELPPTQCETIHGTLPPCLDGAYIRNGPNPQFLPKGPYHLFDGDGMLHCLRISQSKATLCSRYVKTYKYKIENEAGYSLIPNVFSGFNSLVAAAARGSVTAARVITGQYNPSNGIGLANTSLALFGNNLFALGESDLPYKVRVTSNGDIETLNRHDFDGKLGMSMTAHPKTDPETGETFAFRYGPVPPFLTYFYFDSEGRKKPDVPIFSMNRPSFLHDFAITKKYAIFADIQIGMNPLDMISGGSPIGSDPSKITRLGFLPRYATDESKIKWINVPGFNIIHAINAWEEDDGKTITLVAPNILSVEHTLERMELVHAMVEKVKINLDTGIVSRQPLSARNLDFGVINQSYTGKKNRFVYAAIGDPMPKISGVVKLDVSKGEVGCRMYGEGCYGGEPFFVAKDEGEEEDDGYLVSYVHDEKKGESKFIVMDAKSPELDVVAAVKLPRRVPYGFHGLFVRDSDLRRVSVS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0320 574 Pfam Retinal pigment epithelial membrane protein 102 563 IPR004294 GO:0016702
Lal15g0320 574 PANTHER BETA-CAROTENE DIOXYGENASE 39 569 IPR004294 GO:0016702
Lal15g0320 574 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 39 569 - -
Lal15g0320 574 MobiDBLite consensus disorder prediction 1 55 - -
Lal15g0320 574 MobiDBLite consensus disorder prediction 1 18 - -
Lal15g0320 574 MobiDBLite consensus disorder prediction 19 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0320 Lal-Chr15 2133666 2137527 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0320 K09840 - gmx:100777875 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0320 15 2133666 2137527 Lal15g0320 15 2133666 2137527 ECH