Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0287 ATGGCACCAGCACTGGCCTTAAGAGTTGAAAGCTTAGCCACCAGTGGAATACAATCAATACCCAAAGAATACGTGAGGCCAGAAGAAGAGTTGAGTAACATGGCCAATGTGTTTGAAGAGGAAAAGAAGAAAGAAGGGCCTCAAGTTCCAACCATTGACTTGAAAGAAATGGAGTCAGAAGATGAGGAAGTTAGAGAAAAGTGTAGAGAGAAGTTGAATAAAGCAGCAGAAGAATGGGGTGTGATGTATTTGGTTAACCATGGGATCCCAAATGAGGTTATAAACAGACTCAAGAAAGCTGGTGAAACATTCTTTTCTCTTCCTATTGAGGAGAAAGAGAAGTATGCTAATGATCAAGGTTCTGGGAAAATTCAAGGGTATGGTAGCAAGTTGGCTAACAATGTTAGTGGACAACTTGAATGGGAAGATTATTTCTTTCATCTTGCTTTTCCTGAAGATAAACGTGACTTATCCATCTGGCCCAAGACACCCTCTGATTATATTGAGGTTACAACCGAGTATACAAGGCATTTAAGAGGGCTCACAACAAAGATACTGAGGGCATTGTCTCTTTGTTTGGGAGTGGAAGAAGATAGATTAGAGAAGAAAGTTGGGGGTATGGAAGACCTTTTACTTCAACTGAAGATAAACTATTACCCCATTTGTCCCCAGCCAGAGTTAGCTCTTGGAGTTGAAGCCCACACTGATGTAAGTTTACTCACTTTCCTCCTTCACAACATGGTCCCAGGTCTTCAACTTTTCTATGAGGGCAAATGGGTCATAGCAAAATGTGTCCCTAATTCCATTCTGGTGCACATTGGTGACACCCTTGAAATCTTGAGCAATGGGAAATATAAGAGTATTCTTCATAGGGGATTGGTGAACAAGGAAAAGGTTAGAATATCTTGGGCAGTGTTCTGTGAGCCCCCTAAGGATAAGATAATATTGAAGCCACTACCAGAGCTTGTTACTGAAACTGAACCAGCTAAGTTTCCTCCTCGTACTTTTGCTCAACATATTCAGCAAAAAATATTCCGGAAGACTAAGGAAGGTCTCATCAGGAACACTATTCAGGAAGAGCCACAAACTATTGAACACAAACAGACTCTTCAGGAAGACTCAGCAAAATGTGTCCCACAATGA 1143 0.4121 MAPALALRVESLATSGIQSIPKEYVRPEEELSNMANVFEEEKKKEGPQVPTIDLKEMESEDEEVREKCREKLNKAAEEWGVMYLVNHGIPNEVINRLKKAGETFFSLPIEEKEKYANDQGSGKIQGYGSKLANNVSGQLEWEDYFFHLAFPEDKRDLSIWPKTPSDYIEVTTEYTRHLRGLTTKILRALSLCLGVEEDRLEKKVGGMEDLLLQLKINYYPICPQPELALGVEAHTDVSLLTFLLHNMVPGLQLFYEGKWVIAKCVPNSILVHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIILKPLPELVTETEPAKFPPRTFAQHIQQKIFRKTKEGLIRNTIQEEPQTIEHKQTLQEDSAKCVPQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0287 380 Pfam 2OG-Fe(II) oxygenase superfamily 214 309 IPR044861 -
Lal15g0287 380 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 162 IPR026992 -
Lal15g0287 380 Coils Coil 54 74 - -
Lal15g0287 380 Gene3D - 5 352 IPR027443 -
Lal15g0287 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 309 IPR005123 -
Lal15g0287 380 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 353 - -
Lal15g0287 380 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 353 - -
Lal15g0287 380 PRINTS Isopenicillin N synthase signature 72 89 - -
Lal15g0287 380 PRINTS Isopenicillin N synthase signature 184 200 - -
Lal15g0287 380 PRINTS Isopenicillin N synthase signature 269 295 - -
Lal15g0287 380 SUPERFAMILY Clavaminate synthase-like 7 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0287 Lal-Chr15 1935578 1937236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0287 9 351 Glycosyltransferase AT5G59530 29.345 2.11e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0287 K05277 - tcc:18606417 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0287 15 1935578 1937236 Lal15g0287 15 1935578 1937236 ECH