Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0278 ATGACCATGGATTGGCATGCTTGTACGGATGAATACGAAAAGCTCATAATTCGGATGAGCACTCCAAGGGTCGTCATTGATAATGCCGTATGCCCCACCGCGACTCTGGTCAAGGTTGATAGTGCTAGAAGGCATGGTATTCTCTTGGATGCTGTAGAAGTGCTTACTGATCTCAACCTTTTAATTAAGAAGGCCTATATTTCCTGTGATGGAAGGTGGTTCATGGATGTTTTCCATGTCACATATCAAAACGGAAACAAGCTAACAGATAAGAGCCTTTTGAAATATATTGAACAGTCACTTGGGAGCATTGACAATGGTAGAACTAATTACTCGAATGGTCTGACTGCATTGGAGTTAACCGGAACGGACAGGGTTGGTCTTCTATCGGAGGTGTTTGCTGTATTGGCTGATCTTCAATGCGATGTGGTTGAGGCTAAGGTTTGGACTCACAATGGCCGCATCGCCTCCCTAATCTACGTAAGGGACTGCGATTCTGGGTCCACTATTGAGGACTCTCTGAAAATTAATAAAATTGAAGTGCGTTTAAGAAATGTTTTGAAGGGAGACAACGACATTAGAAGTGCTAAAACTTCTGTCTCCATGGCTGTAACACACACTGAAAGAAGGCTGCATCAAATGATGTTCACTGACCGTGATTTTGAAAGAACCCCCATTTTGAATTTTACTGCTGATGCCCCAGTAGTGACTGTTCAGAATTGGGCAGAAAGGGGTTATTCCGTTGTCAATATTCAAGGCAAAGATCGAATGAAGCTATTATTTGATGTTGTATGCAATTTAACATACATGGAATATATTGTGTTTCATGCAACTGTTAACACTGATAGTGACAAAGCATATCTGGAATTTTACATCAGACATAAGGATGGCACCCCAATTAGTTCAGAACCAGAGCGTCAACGTGTAATTCAATGCTTAAAGGCTGCAGTGGAGAGAAGGGCATCTGAGGGTGTTCGACTTGAGTTATGCACAGAAGACAGTCAAGGGCTTCTGGCAGGAGTAATGAGAACTTTCAGAGAAAATGGGCTCAATGTAACAAGGGCTGAGGTATCAACCATGGGGAACAAGGCTACAAATGTGTTCTATGTAACCGATGCGATTGGAAACCCTGCTGATCCAAAAATCATTGAATCGGTTAGGCAGAAAATTGGGTTAGGCAATTTAGAAGTGAAGGAGTTGCCATTGATATGTCATCATCAGAAAGCAGAAAGAGAGGATCAAGCATTTGGAGTTGGTGGGGCAGTGTTAATGTCAATTGGTAACCTCTTGAGAAGGAATCTATACAATATGGGGCTAATCAATTCCTGTTCTTAA 1335 0.4202 MTMDWHACTDEYEKLIIRMSTPRVVIDNAVCPTATLVKVDSARRHGILLDAVEVLTDLNLLIKKAYISCDGRWFMDVFHVTYQNGNKLTDKSLLKYIEQSLGSIDNGRTNYSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVRDCDSGSTIEDSLKINKIEVRLRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFTDRDFERTPILNFTADAPVVTVQNWAERGYSVVNIQGKDRMKLLFDVVCNLTYMEYIVFHATVNTDSDKAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCTEDSQGLLAGVMRTFRENGLNVTRAEVSTMGNKATNVFYVTDAIGNPADPKIIESVRQKIGLGNLEVKELPLICHHQKAEREDQAFGVGGAVLMSIGNLLRRNLYNMGLINSCS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0278 444 CDD ACT_ACR_1 34 103 - -
Lal15g0278 444 ProSiteProfiles ACT domain profile. 326 405 IPR002912 -
Lal15g0278 444 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 442 IPR040217 -
Lal15g0278 444 CDD ACT_ACR_3 246 320 - -
Lal15g0278 444 SUPERFAMILY ACT-like 31 99 IPR045865 -
Lal15g0278 444 SUPERFAMILY ACT-like 322 391 IPR045865 -
Lal15g0278 444 ProSiteProfiles ACT domain profile. 117 201 IPR002912 -
Lal15g0278 444 CDD ACT_ACR_2 116 189 - -
Lal15g0278 444 Pfam ACT domain 118 175 IPR002912 -
Lal15g0278 444 Gene3D - 115 189 - -
Lal15g0278 444 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 3 442 - -
Lal15g0278 444 SUPERFAMILY ACT-like 113 172 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0278 Lal-Chr15 1877822 1881128 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0278 - - gmx:100806283 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0278 15 1877822 1881128 Lal15g0278 15 1877822 1881128 ECH