Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0226 ATGGCTTCTTCTGCCAATTCCCTCATCGATAGCAGCATCAAGAGTTCTCTCACCAAACTTGCACCACTTGAAGCAGTGCTCTTCGATATAGATGGAACTCTTTGTGATTCAGATCCACTCCATTACTATGCTTTCCGTGAGATGCTCCAAGAGGTGATTGGTTTCAATGGAGGTGTTCCTATAACAGAGGAATTTTTTATTGACACTGTTGCTGGCAAGCACAACGATGATATCGCCTTGGCTCTCTTTCCTGATGATCTTCAACGAGGCTTAAAGTTTGTCGATGACAAGGAAGCCTTGTTCCGGAATTTATTTGAAGCTTTAGAAGATAATCCTCTTGATGAACTATCCAGGTTGGCAGCAGAGCAAGTGAAGCCTTTGAGTGGCCTTGATAAAGTGAGGAAATGGATTGAAGATCGTGGGTTGAAGCGAGCTGCTGTTACCAATGCTCCAAGAGCAAATGCAGAACTTATGGTCTCATTACTTGGTCTCTCAGATTTTTTTCAAGCTGTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGATCCCTACTTGAAAGGTCTTGAAGCTCTAAAGGCATCAAAGGATCACACTTTTGTATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTGGCAGCTGGGATGCCTGTTATAGGTTTAGCTACCCGAAACCCAGAGCCTTTACTGATGGAAGCCAAGCCTGCTTTTCTGATCAAGGATTATGATGATCCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGGCTAGTGCACATTAA 792 0.4343 MASSANSLIDSSIKSSLTKLAPLEAVLFDIDGTLCDSDPLHYYAFREMLQEVIGFNGGVPITEEFFIDTVAGKHNDDIALALFPDDLQRGLKFVDDKEALFRNLFEALEDNPLDELSRLAAEQVKPLSGLDKVRKWIEDRGLKRAAVTNAPRANAELMVSLLGLSDFFQAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPEPLLMEAKPAFLIKDYDDPKLWAALEELDKASAH 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0226 263 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 12 261 - -
Lal15g0226 263 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 23 34 IPR006439 -
Lal15g0226 263 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 137 150 IPR006439 -
Lal15g0226 263 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 168 184 IPR006439 -
Lal15g0226 263 CDD HAD_BPGM-like 25 226 - -
Lal15g0226 263 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 223 IPR006439 -
Lal15g0226 263 Gene3D Putative phosphatase; domain 2 38 122 IPR023198 -
Lal15g0226 263 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 23 246 - -
Lal15g0226 263 Pfam Haloacid dehalogenase-like hydrolase 26 223 IPR041492 -
Lal15g0226 263 Gene3D - 24 247 IPR023214 -
Lal15g0226 263 SUPERFAMILY HAD-like 19 256 IPR036412 -
Lal15g0226 263 SFLD Haloacid Dehalogenase 23 246 - -
Lal15g0226 263 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 12 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0226 Lal-Chr15 1533043 1535302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0226 - - gmx:100793483 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0226 15 1533043 1535302 Lal15g0226 15 1533043 1535302 ECH