Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0062 ATGGATGATGTTCAAAATTGGAAGCTAAAGTTGTTCTCAGATCAAGAGCTTTGTTACGCCGATATCATTCCTCCATCTCAGGTTCGCGCGAGAATTGAAGTATCGGTCCTCAACTTCATCAAAATATTGAATGCTCCCAAACCTGCTATTTCTCATTTGCCTCTGATTAAGAGAAATTTGAGCAACAGCAGAGTGAATCATGGTTTGTTGACTGAACTATCATGTGTTTTCCTCTCCCATTCAGTATCTACGAGGTCTCTTATGAAACCTAATGCTGCAAAGGCCTTTGTTAGGGTGTGGAAGGTGATGGAGATGTGCTATCAGATATTGCTTCAGGAAAAGTGTGTCACGCAAAGGGAGCTTTACTACAAGCTGCTCTGTGATTCGCCACATTTGTTTCCTTCTCAAACAGATGTCAACAGAACAATCCAAGATGTTGTAGCATTGCTTCGTTGCAGCCGATTCAGTCTTGGAATCATTGCATCTAGTCGCGGACTCATAGCTGGCCGCATAATTTTGCAGGAACCAGGCAAAGAGGATGTTGATTGCTCTATGTGTGGATCTTCTGGACACACAATCTCTGGTGATTTCAATTTGTTACAGAAGCTCAGTCTATATTCAGATGCACGGTACATTATAATTGTGGAAAAGCGGCTTACTGAGGACCAATTTTTTCATCAAATTCCAAGCATTCTTATCACAGCTAAAGGTTACCCAGATATGGCCACGAGATTTCTTGTTCATCGAATCAGTCGAATTTTTCCAGACTTGCCAATTTTATGTTTGGTGGATTGGAATCCAGCTGGATTAGCTATTTTATGTACCTTCAAATTTGGAAGTATAGGAATGGGCCTAGAAGCTTATAGATACGCTTGCAATGTGAAGTGGTTAGGCCTGCGTGGACATGATCTAGACATGGTGCCTGACCAATCTCTAGTTCCTTTGAAGCCAAAGGATCTTCAAATTGCTGAAAGTTTGATCTCCTCGGGAATCTTACAGGAGAATTACAAGGAAGAGGTGGCCTTAATGGTTCGGAGCGGCAGGAGAGCTGAAATTGAGGCCCTATACTTTCATGGATATGATTATTTGGGGAAGTACATAGCTAAAAAAATTGTACAGTCCGATTATATATAA 1134 0.4136 MDDVQNWKLKLFSDQELCYADIIPPSQVRARIEVSVLNFIKILNAPKPAISHLPLIKRNLSNSRVNHGLLTELSCVFLSHSVSTRSLMKPNAAKAFVRVWKVMEMCYQILLQEKCVTQRELYYKLLCDSPHLFPSQTDVNRTIQDVVALLRCSRFSLGIIASSRGLIAGRIILQEPGKEDVDCSMCGSSGHTISGDFNLLQKLSLYSDARYIIIVEKRLTEDQFFHQIPSILITAKGYPDMATRFLVHRISRIFPDLPILCLVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGHDLDMVPDQSLVPLKPKDLQIAESLISSGILQENYKEEVALMVRSGRRAEIEALYFHGYDYLGKYIAKKIVQSDYI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0062 377 Pfam Type IIB DNA topoisomerase 94 159 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Lal15g0062 377 PRINTS DNA topoisomerase VI subunit A family signature 136 153 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal15g0062 377 PRINTS DNA topoisomerase VI subunit A family signature 154 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal15g0062 377 PRINTS DNA topoisomerase VI subunit A family signature 231 252 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal15g0062 377 PRINTS DNA topoisomerase VI subunit A family signature 264 280 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal15g0062 377 CDD TOPRIM_TopoIIB_SPO 210 362 IPR034136 -
Lal15g0062 377 Gene3D - 163 377 - -
Lal15g0062 377 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 377 IPR002815 GO:0003677|GO:0003918|GO:0005694
Lal15g0062 377 SUPERFAMILY DNA topoisomerase IV, alpha subunit 93 377 IPR036078 GO:0003677|GO:0005694
Lal15g0062 377 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 377 - -
Lal15g0062 377 Gene3D - 24 162 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0062 K10878 - gmx:100784732 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0062 15 436577 439323 Lal15g0062 15 436577 439323 ECH