Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0058 ATGAAGCACCGTATTAGGGAATTCACCAGGTCCTTTGGGAGTCAAATTGATCCTGAAAAATCTGAAGAACTCAAAAGAACCAAAACAGTGATGATTAAATATATAAGGAGACAAGATTTGCCACCTTTTGCAGATATTGAAAACAACCTGACAAGAGTCCTGAAGCTTATTCAGACTGAAGAGCAAAGCAAAAGAGATGGGAACTCAAGGAAAGAAACAGAACTTGTGGGACTAATTGAGGACTTTTACAATCAATACCAATCATTGTATGCACTGTATGGTCGTCTTACTGGAGAGTATGTCAAAGTTATTCCTCGCAGCGTAGAGAGATTTTCTTCAGTATCTTCTTCCTCTAGCTCAGAATCAGATTACTTTTCTTCAGAGGAAGTAGTATATGACACAATCAAGCAGGAACTGGAACTTGTTAATAATAATAGTACAGAAGTCAATGACCTCAACCATAAACTTTTCTCCACAGAAATGGAACGTTATTCTAATCTTGCCTATAATACCAATGAAGTTGTTAAGACTCAAGCACCATTTAACAACATGGCTAATGAGCTTGAGGATCGGTTAATTTCTCGAATGAAAGAGGTGGAGAGCTTGAACTGGCAGAAAAGGAATCTTGAACTTCAAGTTGAAAGCCAAGCATATGAAGTTAAGCAACTTGGTGCAGAAAATACTGAGCTAGAATTGTTATTGGAAGAGACAAAAAGAGCAGTATATGTCTTAAAGGGAAAACTCAAAAGCAATGAGGATAAGGCAATATCCAAAAATGCTGAATTGATGGCACAAATCAACAAGCTCGAACTGGAAGCGAAATCTTTGAGGAACCAGAAAGGAAAAATGGAAGAGAAGTTAAAACACAATAGAAATGAAGCGTTAACCCAAAAGAAGGACTTAACAGAAAAGTTGGATTTGGTATGCAGTCATAACAAAGAATTAGAAGCTCAGTTAGAAAGAGGGAGGGAACAAGTTTCTCAATGCCTAGTTCAGATGGAAAAGTTAAAGGAGAAATTAGATGAAACGACTTCGATTGAGCATGGTTTGATAAAAGAGAAAGATTTTTTTCTTTCAAGGATAAATGACCTGGAACTGGAAATGGAAACTCGATGCAGCAACCAACATGATTTGGAAGAACAGGTACGAAGCGCAATTCATGAAATTAGTCAACTTGTAGATGAAAGGAATGCCCTACAGGATGAAAAATATGAACTGCAAAGAGCAATGATGCAGAAAACGGAAGAGATATCTGCTATTTTGAGTAAACATGAGAACGGTAAAATTGAAGCTTCTATGCATGCTATGGCTTTAACGGAAGAAGTAGAAAACATGAGAGTTGAGTTGAACACTTTGCATGAACAAAAAAGCATGCTGGAGTTACAAAATGAACAAAGGCAAAATGAACATTCAGAAAGCCTAGCAAAAATGGAAACTGAGTGTAGCAACCAACGTGATTTGGAAGAACAGGTACGAAGCGCTATTCATGAAATTAGTCAACTAGTAGATGAAAGAAAGACCCTGCAGGATGAAAAATATGAACTAGAAAGAGCAATGACACAGAAAAAGGAAGAGATATCTGCTATTTTGAGTAAACATGAGAGCGATAAAAATGAAGCTTCTATGCATGCTATGGCTTTAACGAAAGAAGTGCAAAGCATGAGAGTTGAGTTGAACACTTTGCAGGAACAGAAAGGCATGTTGGAGTTACAAAATGAACAAAGGCAAAACGAATATTCAGAAAGCCTAGCAAAAATGGAAACTCAGTGCAGCAACCAACGTGATTTGGAAGAACAGGTACTAAGCGCTATTCATAAAATTAGTCAACTTGTAGATGAAAGAAAGACCCTGCAGGATGAAAAATATGAACTAGAAATAGCAATGACACAGAAAAAGGAAGAGATGTCTGCTATTTTGAGTAAACATGAGAGCGATAAAAATGAAGCTTCTATGCGTACTATGGCTTTAACGAAAGAAGTACAGAGTATGAGAGTTGAGTTGAACACTTTGCAGGAACATAAAAGCATGTTGGAGTTACAAAATGAACTAAGGCAAAATGAATATTCAGAAAGCCTAGCAAAAATGGAAAACTTGAATGACAAGTTAGCAACCAAGGAGGAAACGATAAAGAAGTTAATGGGAACCATTGAACAAATAAGTGTAGAGAATAAAGAAGCCAAGATTTGGTCGAAGATGAATCAGCGACTTATAGAAAGGAAAATAGAAGAATTGGCTGAGAAGTTTAAGAGGAAAATGGAAGACAATATCCGCCTTTTGCACCAAAGGATCCATATAGCAGAACAGCTGAACATTGAAAACAAGGATAGTTGCAAAAGGACAAAGCAAAGATATGAGCAAGAGAACAAAATACTTGGAGGGAAAATTGCTTGTTATGAAAATGAAATAAAGACTATTAAAGTGAGTGATCAAGATGAGTTGGATTTGGCTGCTAGGAAGGTTGAGGAACACATAGATTATGTTCTGAGCCTTGTATCTAAAGTGTTATGTGAGGTTCAGTCTGCAAAGGATTGGATAAAGAAAAAAAATGGTGAGATGAAACAACTAAAAGAAAAAGTGGATCAACTTACAACATTACTCAATGACAAAGAAGATAAGGAATTGTTTTTAAGAGAGAAAATATGGGAATTAGAAGCCAGTGTGAACAAGGAAGGAGGGGAGAAATTGAACCTTGTGAAGGCAGTGAGTCAGCTTGAAAAGAAAGTTAGAAAATTGGAAAAGAATCTAAAAGAGAGGGATGAGGATTTGGTTGGCCTTGGGGAGAAGAAGAGAGAAGTCATAAGGCAGCTTTGTATTCTTGTTGAGTTCCATCGCGAAAGTTGTGACCATCTCAAGGGTCTGATCACAAAGACAAGGATCAATAACAGAACATGA 2892 0.3693 MKHRIREFTRSFGSQIDPEKSEELKRTKTVMIKYIRRQDLPPFADIENNLTRVLKLIQTEEQSKRDGNSRKETELVGLIEDFYNQYQSLYALYGRLTGEYVKVIPRSVERFSSVSSSSSSESDYFSSEEVVYDTIKQELELVNNNSTEVNDLNHKLFSTEMERYSNLAYNTNEVVKTQAPFNNMANELEDRLISRMKEVESLNWQKRNLELQVESQAYEVKQLGAENTELELLLEETKRAVYVLKGKLKSNEDKAISKNAELMAQINKLELEAKSLRNQKGKMEEKLKHNRNEALTQKKDLTEKLDLVCSHNKELEAQLERGREQVSQCLVQMEKLKEKLDETTSIEHGLIKEKDFFLSRINDLELEMETRCSNQHDLEEQVRSAIHEISQLVDERNALQDEKYELQRAMMQKTEEISAILSKHENGKIEASMHAMALTEEVENMRVELNTLHEQKSMLELQNEQRQNEHSESLAKMETECSNQRDLEEQVRSAIHEISQLVDERKTLQDEKYELERAMTQKKEEISAILSKHESDKNEASMHAMALTKEVQSMRVELNTLQEQKGMLELQNEQRQNEYSESLAKMETQCSNQRDLEEQVLSAIHKISQLVDERKTLQDEKYELEIAMTQKKEEMSAILSKHESDKNEASMRTMALTKEVQSMRVELNTLQEHKSMLELQNELRQNEYSESLAKMENLNDKLATKEETIKKLMGTIEQISVENKEAKIWSKMNQRLIERKIEELAEKFKRKMEDNIRLLHQRIHIAEQLNIENKDSCKRTKQRYEQENKILGGKIACYENEIKTIKVSDQDELDLAARKVEEHIDYVLSLVSKVLCEVQSAKDWIKKKNGEMKQLKEKVDQLTTLLNDKEDKELFLREKIWELEASVNKEGGEKLNLVKAVSQLEKKVRKLEKNLKERDEDLVGLGEKKREVIRQLCILVEFHRESCDHLKGLITKTRINNRT 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0058 963 Coils Coil 688 715 - -
Lal15g0058 963 Coils Coil 749 769 - -
Lal15g0058 963 Coils Coil 845 872 - -
Lal15g0058 963 Coils Coil 781 801 - -
Lal15g0058 963 Coils Coil 607 634 - -
Lal15g0058 963 Coils Coil 252 339 - -
Lal15g0058 963 Coils Coil 660 680 - -
Lal15g0058 963 PANTHER COP1-INTERACTIVE PROTEIN 1 482 591 - -
Lal15g0058 963 PANTHER COP1-INTERACTIVE PROTEIN 1 585 959 - -
Lal15g0058 963 PANTHER COP1-INTERACTIVE PROTEIN 1 45 482 - -
Lal15g0058 963 Coils Coil 375 416 - -
Lal15g0058 963 Coils Coil 894 928 - -
Lal15g0058 963 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 8 100 IPR011684 GO:0003779
Lal15g0058 963 Coils Coil 220 240 - -
Lal15g0058 963 Coils Coil 544 578 - -
Lal15g0058 963 Coils Coil 484 525 - -
Lal15g0058 963 Coils Coil 435 469 - -
Lal15g0058 963 MobiDBLite consensus disorder prediction 462 487 - -
Lal15g0058 963 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 585 959 - -
Lal15g0058 963 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 45 482 - -
Lal15g0058 963 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 482 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0058 Lal-Chr15 416544 419711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0058 - - lang:109332281 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0058 15 416544 419711 Lal15g0058 15 416544 419711 ECH
Lal15g0058 15 416544 419711 Lal16g1164 16 7944345 7952434 PCT
Lal15g0058 15 416544 419711 Lal15g1443 15 16634198 16640460 PCT