Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0053 ATGTCAAAGGATATATGCAATAGAAACATCTTTGGCTTCTTCTCCTTGCTTTTTTCCCTTTGGTGCCTCTTCTTTATCTTATACTCCAAGCTTTCTCTTGTTCATGGAATTGGAGCTATGTTAGAGTTCAATGAAACAGCTAGCTCCAATAGTTTTGGAGGCATTAGTCAGAAACCGGTAACAAATAGAAGATTAGAACAAGTATTTTTGCAAGAGTTTGTTAATAGTGATTTAGTGTGCAAGCTACATTCTAGAGAACACGAAAAGAAACTTCAACGAGTAAAACTTGGTGATGAGAAATTTAATTCTACAAATCTCAATCATGATGAATTTAGAAACATAGCAAAGCAAGAAAAAAACAAGGGTAACGATGACTATGCCCATAATAACATAACTCATAGGCTTGAACCTGATGGTTCGGTGTACAACTATGCCTCTGAGTCCAAAGGTGCAAAGGTGGTGGCTCATAATAAGGAAGCTAAAGGAGCAAAAAATATACTAGGGAAGGATCATGACAAGTACCTAAGAAACCCTTGTTCTGTTGGAGGAAAATTTGTTGTTATTGAGCTTGCAGAAGAGACTTTAGTTGATTCTGTGAAAATTGCAAATTTTGAGCATTATTCTTCTAACTTCAAGGAGTTTGAATTGGCTGGTAGTTTGAGCTATCCAACTGAAGCATGGACAACACTTGGAAACTTCATTGCTGCTAATGTTAAGCATGCACAGATCTTTAAGCTCTCTGAACCTAAATGGGTAAGGTACTTAAAGTTGAGTTTGCTTAGTCATTATGGATCTGAGTTTTACTGCACTCTGAGTGTTGTAGAAGTTTATGGCATCAATGCTATAGAACGGATGCTTGAGGATCTAATTGTTTCTTCTTCTGGAGGATCTATTCCTGACAAGACGGTGGAGCATAATAATAATAATAATAATAATATCAGTGACAATAACACTTCTTTGAAGTCAGAAGCAGGACAAATTGATTGGAAAGGAAAAGAAGTTGAAGGTAAGAACCATACTGTGGCTGCTGATATGTCAAGCAATAATGAGACTCAAAAGTTTGATGTGGAAGTGACAAAAAGTCCAGTTGTAGAATTAAGACAACAACTGAATGGTAGGGTAGGTGGTGAAGCTGTACTGAAGATTTTGATGCAGAAAGTGAGGACAGTGGAGGTGAATTTATCTTTGCTTGAAGAATACATCAAGGAATTGAACAAGAGACTAGGTGTTACAATACCAGATCTTCAGAAAGAGCTTTCGATAATATCAGAAAGCCTTTCACAAAGCAAGTTAGAGATAAATAATCTCTTGCAATGGAACACAAATATGGTAAAAGAAATATCTGAAGTTGAGTCATGGAAAAATGCTGTTTTATCTCAGCTTCATGAATTGACCAAAGAAAAAAGCATACTGAGAATAGAAGTTCAAAAGGTTGCAAGTGATCAAGCAAATCTGGAAAACAAAGAGCTTGCTGTGTTAGCAACAAGTCTTGTTTTTGTGTGCCTTGCAATTCTGAAGATAATTTCAGTACTTGTGATGACATTTTCTACAACATGCAACGCAGATAAGGTACGCCAGACAATTAGAGGATGGGTTATGTTATTTGTATGCTGCAGTGTAACAATATTCATTCTTAATATTGCAAACTACATTAAAAAGGAAAGTGTTTCCAGATGTGGGTCTTGCCTTGCAAAAGCATTACTGCATGCCATTTCTGGTGATAAGCACATAGTCCAGCCATTGTACTTCCTAACTCCACAGCAGGCATCACTAGTAATGTTAAAGCCTTATCACCAAATATAA 1803 0.3649 MSKDICNRNIFGFFSLLFSLWCLFFILYSKLSLVHGIGAMLEFNETASSNSFGGISQKPVTNRRLEQVFLQEFVNSDLVCKLHSREHEKKLQRVKLGDEKFNSTNLNHDEFRNIAKQEKNKGNDDYAHNNITHRLEPDGSVYNYASESKGAKVVAHNKEAKGAKNILGKDHDKYLRNPCSVGGKFVVIELAEETLVDSVKIANFEHYSSNFKEFELAGSLSYPTEAWTTLGNFIAANVKHAQIFKLSEPKWVRYLKLSLLSHYGSEFYCTLSVVEVYGINAIERMLEDLIVSSSGGSIPDKTVEHNNNNNNNISDNNTSLKSEAGQIDWKGKEVEGKNHTVAADMSSNNETQKFDVEVTKSPVVELRQQLNGRVGGEAVLKILMQKVRTVEVNLSLLEEYIKELNKRLGVTIPDLQKELSIISESLSQSKLEINNLLQWNTNMVKEISEVESWKNAVLSQLHELTKEKSILRIEVQKVASDQANLENKELAVLATSLVFVCLAILKIISVLVMTFSTTCNADKVRQTIRGWVMLFVCCSVTIFILNIANYIKKESVSRCGSCLAKALLHAISGDKHIVQPLYFLTPQQASLVMLKPYHQI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0053 600 Coils Coil 387 407 - -
Lal15g0053 600 Gene3D - 143 289 - -
Lal15g0053 600 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 62 547 - -
Lal15g0053 600 PANTHER MEMBRANE PROTEIN CH1 RELATED 62 547 IPR045120 GO:0016020
Lal15g0053 600 Pfam Sad1 / UNC-like C-terminal 156 278 IPR012919 -
Lal15g0053 600 ProSiteProfiles SUN domain profile. 121 281 IPR012919 -
Lal15g0053 600 SUPERFAMILY Galactose-binding domain-like 180 277 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0053 Lal-Chr15 379896 382764 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0053 - - gmx:102668828 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0053 15 379896 382764 Lal15g0053 15 379896 382764 ECH