Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1892 ATGTTTGGTTCAAAGATATCTCCTCTAAAATCTGCTAAACCTAACTCTGGTGGTCATGTCTATCCAATTAAATCTGGGCCCAACCCATTTGACTCTGATGATGAAACAAGGGATAACAAAAACTATAATTCATCAAGGAAGGTTTCATCAAAACATGCACTAGTTGCAGTAGAAGCCAGGACTAACCCTTTTGATGACATTGATGCTAATAAGAGTGCTTCGTCATCTTCATATGCTCTTCGATCAGCAGACCGAAGCAGGTACAAGAATAATTTCTGTGTCTCTGGGGGATTGGAGAATCAATCTGTGCAAGAGTTGGAGGACTATGCCGTTTACAAGGCTGAAGAGACTACAAAATCAGTCAACAATTGTTTGAAGATAGCAGAGAGCATACGAGAGGATGCTGCCCAAACTTTAGCTATCCTTCATAAACAGGGAGAACAAATTACCAGGACTCACTATGTCGCTGCTGACATCAATCAGGATTTAAGTCGGGGAGAAAAGCTTTTAGGTAGCCTTGGTGGCCTCTTCAGCAAAACTTGGAAACCAAAGAAAATGCATGCAATTAGAGGCCCTGTTATCTTTGGAAATGATCCAGTCAGAAGTAAGGGTAACCATTTGGTGCAGAGAGAGAAGTTGGGATTAACTTCTGCGCACAAAAGGCAGTCCATGCAGCGGACACCACATCAGGAACCAATAAATGCACTTGAAAAAGTTGAGGTTGAAAAGGGGAAGCAAGATGATGCACTGTCACATATTAGTGATATACTGGGAGAGCTGAAAGACGTGACCATCCACATGGGATCTGAAATTGAGAGGCAGAACAAAGCCCTGAATCATCTAGAGGATGATATGGATGTGTTGAATTCCCGCGTGAAAGGAGCCAATCGACGTGGCCGTCGTTTGCTTGGAAAATAA 918 0.427 MFGSKISPLKSAKPNSGGHVYPIKSGPNPFDSDDETRDNKNYNSSRKVSSKHALVAVEARTNPFDDIDANKSASSSSYALRSADRSRYKNNFCVSGGLENQSVQELEDYAVYKAEETTKSVNNCLKIAESIREDAAQTLAILHKQGEQITRTHYVAADINQDLSRGEKLLGSLGGLFSKTWKPKKMHAIRGPVIFGNDPVRSKGNHLVQREKLGLTSAHKRQSMQRTPHQEPINALEKVEVEKGKQDDALSHISDILGELKDVTIHMGSEIERQNKALNHLEDDMDVLNSRVKGANRRGRRLLGK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1892 305 MobiDBLite consensus disorder prediction 30 45 - -
Lal14g1892 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 240 302 IPR000727 -
Lal14g1892 305 Gene3D - 97 174 - -
Lal14g1892 305 CDD SNARE_Qc 245 301 - -
Lal14g1892 305 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 305 - -
Lal14g1892 305 CDD SNARE_SNAP25N_23N_29N_SEC9N 108 172 IPR044766 GO:0005484|GO:0031201
Lal14g1892 305 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 305 - -
Lal14g1892 305 Coils Coil 271 298 - -
Lal14g1892 305 MobiDBLite consensus disorder prediction 1 53 - -
Lal14g1892 305 SUPERFAMILY SNARE fusion complex 101 171 - -
Lal14g1892 305 SUPERFAMILY SNARE fusion complex 243 303 - -
Lal14g1892 305 SMART tSNARE_6 235 302 IPR000727 -
Lal14g1892 305 SMART tSNARE_6 106 173 IPR000727 -
Lal14g1892 305 Gene3D - 237 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1892 Lal-Chr14 18348965 18351702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1892 K18211 - gmx:100809874 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1892 14 18348965 18351702 Lal14g1892 14 18348965 18351702 ECH
Lal14g1892 14 18348965 18351702 Lal7g1365 7 18769857 18774411 LSH