Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1880 ATGCCGCCACTACCGTCTCTGCATCTTCGAAGACTCTTGCTTCGATCGTTACGCTCCTCTTCCTTCTCATTGATCTCTTCTTCTCCCATTCAATCTACTCCTCTACTTCCCAAACTACCTTCTTCCACACTTTCATCCTCATATTTTCTCACTTCACCTTCTCTCTTCACAACCCTTCATTTCTCATCCCAGACCCTATCCGATGAACCTGATCCAATTGTGCGATCCCTCTCCTCTGAAATTCTCAACGATCCTGATTCCGATCCTGTCTCTGTCTCTCAGCGCCTCCACCTCAGCTTCTCTCACATTACCCCAACCCCTGATTTGGTTCTCCGAACCCTGAATCTCTCCCCCGATGCTGGACGCACCGTTTTAGGGTTCCACCGCTGGCTCAGCTCCAATCCCAAGTTCACCTACACTGACGAAACACTATCGTTCTTCGTTGATTACTTCGGCCGCCGTAAGGATTTTAAGGTCATTCACGAACTTCTTTCTGGTGAAAGTTCTCGCTCCGTCGCTGGTCCCAAAACCCTATTCTCCGCTATCGACCGGATTGTCCGAGGGGATCGAGCCAGTCGAGCGGTTCAATTCTTTGAGAAAATGGAAAGGGATTACGGTTTGAAGCGCGATCGCCATTCATTGAAGGTGGTGGTTGAGAAGCTATGCGAAAAGGGGTTTGCAAGTCATGCTGAGAAAATGGTAAAGGATTTGGCGAACGAATTCTTTCCAGATCAACCTACGTGCGATATGTTGATTAAAGGTTGGTGTGCTGACGGAAAGCTAAAAGAAGCTTATAGGCTCGCACGTGAGATGTATCGTGGAGGGTTTGGGCTTGGTGTTGATGCATATAACGCAATTCTTGATTGTGTGTGCAAGCTCTGTCGCAAAAATGATCCCTTCCGGCTTCAATCAGAGGCGGAGAAGGTCCTTGTTGAGATGGACTATCACGGGGTTCCAAGGAATGTGGAGACATTCAATGTGTTGATAACAAATTTTTGTAAGCTTAGGAAAACTGAGGATGCATTGAAATTCTTCAATCGGATGGCGGAGTGGGGTTGTTATCCCAATGAAACCACATTTCTGGTGTTGATTAGGAGTTTGTATCAGGCTGCAAGGTTGGAAGAAGGGGATGAAATGATAGATAGGATGAGATCCGCTGGGTTCGGCAAAATGCTTGATAAGAAAGCTTATTATGAGTTCCTCAAGATTTTGTGTGGCATTGAGAGAATTGATCATGCTTTGAGTGTCTTTGCAAAGATGAAGGCCGATGGTTGTGAACCTGGGGTTAGAACTTATGACTTGTTGATGGTGAAATTGGGTGCCCACAACCGTGTTGATAAGGCTAATGTTCTCTTCAATGAAGCGAAAAATAGAGGAGTGCCTGTCACACCCAAAGACTATCCTATTGATCCTAGGTTCTTGAAGAAGGCCAAGGATGCCAAGGGGGAGAAGAAGGTGAAGAAAAGGGAAACTTTGCCTGAGAAAATGGCTAGGAAGAGAAGCCGGTTGAAACAGATTCGGTTGAGTTTTGTGAAGAAGCCTAAGCGAATGATGGGTGGGCGTGGCTGA 1569 0.4646 MPPLPSLHLRRLLLRSLRSSSFSLISSSPIQSTPLLPKLPSSTLSSSYFLTSPSLFTTLHFSSQTLSDEPDPIVRSLSSEILNDPDSDPVSVSQRLHLSFSHITPTPDLVLRTLNLSPDAGRTVLGFHRWLSSNPKFTYTDETLSFFVDYFGRRKDFKVIHELLSGESSRSVAGPKTLFSAIDRIVRGDRASRAVQFFEKMERDYGLKRDRHSLKVVVEKLCEKGFASHAEKMVKDLANEFFPDQPTCDMLIKGWCADGKLKEAYRLAREMYRGGFGLGVDAYNAILDCVCKLCRKNDPFRLQSEAEKVLVEMDYHGVPRNVETFNVLITNFCKLRKTEDALKFFNRMAEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGKMLDKKAYYEFLKILCGIERIDHALSVFAKMKADGCEPGVRTYDLLMVKLGAHNRVDKANVLFNEAKNRGVPVTPKDYPIDPRFLKKAKDAKGEKKVKKRETLPEKMARKRSRLKQIRLSFVKKPKRMMGGRG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1880 522 Pfam PPR repeat 249 275 IPR002885 -
Lal14g1880 522 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 244 278 IPR002885 -
Lal14g1880 522 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 321 355 IPR002885 -
Lal14g1880 522 MobiDBLite consensus disorder prediction 478 499 - -
Lal14g1880 522 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Lal14g1880 522 Pfam Pentatricopeptide repeat domain 411 437 IPR002885 -
Lal14g1880 522 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Lal14g1880 522 TIGRFAM PPR: pentatricopeptide repeat domain 400 428 IPR002885 -
Lal14g1880 522 TIGRFAM PPR: pentatricopeptide repeat domain 324 357 IPR002885 -
Lal14g1880 522 Gene3D Tetratricopeptide repeat domain 153 295 IPR011990 GO:0005515
Lal14g1880 522 Pfam PPR repeat family 321 367 IPR002885 -
Lal14g1880 522 Gene3D Tetratricopeptide repeat domain 392 514 IPR011990 GO:0005515
Lal14g1880 522 Gene3D Tetratricopeptide repeat domain 296 391 IPR011990 GO:0005515
Lal14g1880 522 PANTHER ATPASE EXPRESSION PROTEIN 3 32 518 - -
Lal14g1880 522 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL 32 518 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1880 147 480 Glycosyltransferase AT1G05670 23.978 1.27e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1880 - - gmx:100782387 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1880 14 18266533 18268101 Lal14g1880 14 18266533 18268101 ECH