Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1870 ATGTCAAAGCTTCAAGTTCATCAACTTAATCAGTTAAGGGAAATTTTTGGTAGATTTGACATGAATTCAGATGGCAACCTAACCACGTTAGAGTTAGCAGCGCTTCTCAGGTCTCTGGGGTTAAAGCCTTCAGGTGACCAAGTTGAAGTATTATTAGCCAACATGGACTCAAATGGGAATGGGTTTGTTGAGTTTGATGAATTGGTCTCTGCCATGTTGCTTGATATCGATGCTCAGGAATTGGTTAATCAAGAACAGCTAGCTCTTAGGCTACTGATACAACAGCAATGGATATATATCTGCCGCAGAGTTAGCTGGGTAATGGCCAAAATGGGTCAGCCCCTCACATATAGAGAGCTCACTCATATGATCAAAGAGGCTGACACAAATGGTGATATGGTGTAA 405 0.4173 MSKLQVHQLNQLREIFGRFDMNSDGNLTTLELAALLRSLGLKPSGDQVEVLLANMDSNGNGFVEFDELVSAMLLDIDAQELVNQEQLALRLLIQQQWIYICRRVSWVMAKMGQPLTYRELTHMIKEADTNGDMV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1870 134 ProSiteProfiles EF-hand calcium-binding domain profile. 7 42 IPR002048 GO:0005509
Lal14g1870 134 PANTHER CALCIUM BINDING PROTEIN 3 134 - -
Lal14g1870 134 Gene3D - 2 134 - -
Lal14g1870 134 ProSiteProfiles EF-hand calcium-binding domain profile. 43 78 IPR002048 GO:0005509
Lal14g1870 134 SUPERFAMILY EF-hand 2 133 IPR011992 -
Lal14g1870 134 ProSitePatterns EF-hand calcium-binding domain. 20 32 IPR018247 -
Lal14g1870 134 Pfam EF-hand domain pair 10 72 IPR002048 GO:0005509
Lal14g1870 134 SMART efh_1 47 75 IPR002048 GO:0005509
Lal14g1870 134 SMART efh_1 11 39 IPR002048 GO:0005509
Lal14g1870 134 CDD EFh 11 72 IPR002048 GO:0005509
Lal14g1870 134 PANTHER CALCIUM-BINDING PROTEIN CML15-RELATED 3 134 - -
Lal14g1870 134 ProSitePatterns EF-hand calcium-binding domain. 56 68 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1870 Lal-Chr14 18188280 18194333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1870 8 134 EF-hand Containing Proteins AT1G18530 63.077 3.62e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1870 K13448 - gmx:100795885 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1870 14 18188280 18194333 Lal14g1870 14 18188280 18194333 ECH
Lal14g1870 14 18188280 18194333 Lal7g1321 7 18504354 18504836 LSH