Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1587 ATGGACCCCGACAACGATTCCAAAAACGTTGACAAATCCCCTATTCTAATGGATTCCGATGACTCTTCTTCTGTTCAGGGCAAAGACAAAGAAAAAGAGGAGCTCACTGAGACGATGAAGAAACTACATATTGAAGGATCATCATCTGGGAGTGGACCCTTCAAAAGAAAACCGGTCATTATCATAGTTGTAGGAATGGCAGGGAGTGGGAAAACAACACTCCTCCATAGGTTGGTTGCCCATACACACCAAAAAAACATTAGGGGGTATGTGATGAATCTTGACCCAGCTGTCATGACACTCCCATTTGCTTCTAACATTGATATAAGAGACACAGTCAAGTACAAGGAAGTCATGAAGCAGTTCAACCTTGGCCCTAATGGAGGAATCATGACCTCCCTTAACTTGTTCGCTACCAAGTTTGATGAGGTAGTTTCTGTTATTGAGAAGCGAGCTGATCAACTTGATTATGTTCTTGTGGACACCCCTGGTCAGATTGAGATATTCACCTGGTCTGCTTCTGGTGCTATAATCACAGAAGCTTTTGCCTCCACATTTCCCACTGTAGTTACCTATGTAGTTGATACACCTCGTGCAGAAAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTCTACAAGACAAGGTTACCTCTCATTTTGGCATTCAACAAGGTTGATGTTGCACAACATGAGTTTGCCTTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGTAAGTTCAGATCAATCCTACACGTCAACTTTAACTCAGAGCCTTTCTCTTGCACTGGATGAATTCTACAAGAATTTAAGATCAGTTGGAGTTTCTGCAGTTTCTGGTGCAGGAATTGAAGCCTTCTTTAAGGCTGTCGAAACCAGTGCAGAGGATTACATGGAAAACTATAAGGCTGATCTTGATAAAAGACGCGAAGAGAAGCAGCGTTTGGAGGAAGACCGCAAGAGGGAGAGCATGGATAAATTGAGGAGGGACATGGAGGAATCTGGGGGAGAAACTGTAGTCTTGAGCACTGGTTTGAAGGACAAAGAAAAAGGGAGTAAAAGCATGATGGATGAAGATGAGGTTGAAGAGGATGAGGACATGGATGATGATGAAGATTTGGGGATATACAGTGAAGAAGATGATGTTATAGATGAGGAGGAAGATGAGGAGGTCGATAGGTTCGTGATGTGA 1212 0.4323 MDPDNDSKNVDKSPILMDSDDSSSVQGKDKEKEELTETMKKLHIEGSSSGSGPFKRKPVIIIVVGMAGSGKTTLLHRLVAHTHQKNIRGYVMNLDPAVMTLPFASNIDIRDTVKYKEVMKQFNLGPNGGIMTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRAENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHEFALEWMEDFEAFQAAVSSDQSYTSTLTQSLSLALDEFYKNLRSVGVSAVSGAGIEAFFKAVETSAEDYMENYKADLDKRREEKQRLEEDRKRESMDKLRRDMEESGGETVVLSTGLKDKEKGSKSMMDEDEVEEDEDMDDDEDLGIYSEEDDVIDEEEDEEVDRFVM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1587 403 PANTHER XPA-BINDING PROTEIN 1-RELATED 22 399 IPR004130 -
Lal14g1587 403 Coils Coil 25 45 - -
Lal14g1587 403 MobiDBLite consensus disorder prediction 350 364 - -
Lal14g1587 403 Pfam Conserved hypothetical ATP binding protein 63 300 IPR004130 -
Lal14g1587 403 CDD GPN1 59 299 - -
Lal14g1587 403 MobiDBLite consensus disorder prediction 1 15 - -
Lal14g1587 403 PANTHER GPN-LOOP GTPASE 22 399 - -
Lal14g1587 403 Coils Coil 305 332 - -
Lal14g1587 403 MobiDBLite consensus disorder prediction 317 342 - -
Lal14g1587 403 MobiDBLite consensus disorder prediction 365 403 - -
Lal14g1587 403 MobiDBLite consensus disorder prediction 317 403 - -
Lal14g1587 403 PRINTS Transforming protein P21 ras signature 59 80 - -
Lal14g1587 403 PRINTS Transforming protein P21 ras signature 219 232 - -
Lal14g1587 403 PRINTS Transforming protein P21 ras signature 279 301 - -
Lal14g1587 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 298 IPR027417 -
Lal14g1587 403 MobiDBLite consensus disorder prediction 1 36 - -
Lal14g1587 403 Gene3D - 58 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1587 Lal-Chr14 16417360 16421219 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1587 K24104 - gmx:100797318 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1587 14 16417360 16421219 Lal14g1587 14 16417360 16421219 ECH