Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1580 ATGAACGCTTTCCCTTCTCCACCACCTCCTTCTTCTTCTTCTTCTTCCAACTTCACTCTTTTCACTCACTCTAAAAACTCCAACTACCTCTTCAAATTCTCACTCAAACTTCCCGTTTTACCCCTACCATGTTGCTCTCTCGGGGACTCGTCCACGTCAGCCACAGTGTTGGACAAAAATGTCATTTCATCTGAAGATAATTCATACAATGCTGTTTCTCAAAGAGACTCAAACTTTGAAGGAGCGCTAGTGGTTCGCCGGCCGGTGATGGAGTTTTCCGGCGATGATTCCGATGAAGAAGAAGAAGAAAAGAAGAAGGAGATAATAGAGGAAGATAAACCAAATGTTTATGCGATTGATACGGGACTTAATAAGTTTGCAAAGAAGATGCCGATGTTTGAGCCATCGAGGATGGGATCAGATTCCAAAGAGAAACCACTTACTGTGAATTTGGACTTGGCATTATATAGGGCAAAGGTTTTGGCGCGAAAATTTCAATATGAAGAATCAGAATCAATACTTCAGAAGTGTATATTCTATTGGCCAGAAGATGGAAGAGCTTATGTTGCACTTGGGAAAATTTTGAGCAAGCAATCAAAAACAGTTCAAGCTAGAGAGATATATGAGAACGGTTGCCAAGCTACTCAGGGTGAAAATTCCTACATTTGGCAGTGCTGGGCTGTTCTTGAAATGAAAATGGGGAATGTGAGGAGAGCAAGAGAGTTATTTGATGCTGCTACCGTTGCTGATAAGAGGCATGTTGCTGCTTGGCATGGATGGGCAATTCTAGAGTTAAAGCAGGGAAATCTAAAAAAGGCGAGGAATCTGCTAGCCAAAGGTCTTGAATATTGTGGACAGAATGAGTACATATACCAAACACTTGCATTGCTTGAAGCTAGAGCGAATAGATATCAGCAGGCTAGATATTTATTCAGTCAGGCCACTAAGTGTAATCCTAAAAGCTGTGCAAGTTGGCTTGCTTGGGCACAAATGGAGGTGGAACAGGAAAACTACCGTGCTGCTAGGCAGTTGTTTGAGAAAGCAGTGCAGGCAAGTCCTAAAAACAGGTTTTCTTGGCATGTATGGGGCCTTTTTGAAGCTAACCTGGGCAACATTGATAAGGGAACAAAACTTCTAAAGATAGGTCATGCTCTAAATCCAAGGGATGCTGTTCTCCTTCAGTCTCTTGCATTACTAGAATACAAACATTCAACTGCAAACCTTGCTCGGGTTTTATTTAGGAGAGCATCTGAGTTGGATCCAAGGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACTTGAATACAGCCAGAGAATTATACCAAAAAGCTCTAAGAATAGATTCAAACAGTGAGAGTGCTGCCAGATGTCTCCAGGCTTGGGGTGTTCTAGAGCAGAGGGCTGGTAATCTTACAGCTGCCCGTAGATTATTTAGATCCTCATTGAATATAAATTCTCAGAGTTATGTGACATGGATGACTTGGGCAACAATGGAGGAAGATGAAGGGAATTCTGTGCGTGCTGAAGAGATTCGTAACCTCTATTTCCAGCAGCGCACGGAAGTAGTAGATGATGCTTCATGGGTTATGGGATTCTTAGATATTATAGACCCTGCCATTGACCGTTTGAAGAGACTTTTCAAGATGGACCCAAATTCATACAACATGCCACCAGATACATCGAGAAATATTTCCGGAACAAATAAGAGCAGGATTGATTTAGCCAGCCCATCTTCCATTAGCAATGATGATGATGAAAGTGATTTTGATTTGGATGCTTTCATTATAAAGAGGTTGTCCTTGGATCCATCCAACCTTGAAGTTCAGTTAGGAACACCAAAAAGTTCTTCTGTGAAGAGAAGTCAAGCTCCAAGAAGGATATGGAAATCATATTATAGAATTGCCAAAAGTGTAAGTTAA 1938 0.4169 MNAFPSPPPPSSSSSSNFTLFTHSKNSNYLFKFSLKLPVLPLPCCSLGDSSTSATVLDKNVISSEDNSYNAVSQRDSNFEGALVVRRPVMEFSGDDSDEEEEEKKKEIIEEDKPNVYAIDTGLNKFAKKMPMFEPSRMGSDSKEKPLTVNLDLALYRAKVLARKFQYEESESILQKCIFYWPEDGRAYVALGKILSKQSKTVQAREIYENGCQATQGENSYIWQCWAVLEMKMGNVRRARELFDAATVADKRHVAAWHGWAILELKQGNLKKARNLLAKGLEYCGQNEYIYQTLALLEARANRYQQARYLFSQATKCNPKSCASWLAWAQMEVEQENYRAARQLFEKAVQASPKNRFSWHVWGLFEANLGNIDKGTKLLKIGHALNPRDAVLLQSLALLEYKHSTANLARVLFRRASELDPRHQPVWFAWGWMEWKEGNLNTARELYQKALRIDSNSESAARCLQAWGVLEQRAGNLTAARRLFRSSLNINSQSYVTWMTWATMEEDEGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLDIIDPAIDRLKRLFKMDPNSYNMPPDTSRNISGTNKSRIDLASPSSISNDDDESDFDLDAFIIKRLSLDPSNLEVQLGTPKSSSVKRSQAPRRIWKSYYRIAKSVS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1580 645 Pfam Tetratricopeptide repeat 426 456 IPR019734 GO:0005515
Lal14g1580 645 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
Lal14g1580 645 MobiDBLite consensus disorder prediction 563 590 - -
Lal14g1580 645 Gene3D Tetratricopeptide repeat domain 392 571 IPR011990 GO:0005515
Lal14g1580 645 Gene3D Tetratricopeptide repeat domain 150 391 IPR011990 GO:0005515
Lal14g1580 645 SUPERFAMILY TPR-like 376 559 IPR011990 GO:0005515
Lal14g1580 645 ProSiteProfiles TPR repeat profile. 322 355 IPR019734 GO:0005515
Lal14g1580 645 SUPERFAMILY TPR-like 79 400 IPR011990 GO:0005515
Lal14g1580 645 SMART tpr_5 390 423 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 461 494 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 288 321 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 424 457 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 322 355 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 151 184 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 220 253 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 254 287 IPR019734 GO:0005515
Lal14g1580 645 SMART tpr_5 185 218 IPR019734 GO:0005515
Lal14g1580 645 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 8 635 IPR044624 GO:0003729|GO:0006397
Lal14g1580 645 SMART hat_new_1 234 266 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 302 334 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 438 473 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 336 368 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 475 507 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 199 232 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 268 300 IPR003107 GO:0006396
Lal14g1580 645 SMART hat_new_1 404 436 IPR003107 GO:0006396
Lal14g1580 645 Pfam Tetratricopeptide repeat 294 355 - -
Lal14g1580 645 Pfam Tetratricopeptide repeat 229 279 - -
Lal14g1580 645 MobiDBLite consensus disorder prediction 563 588 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1580 - - mtr:MTR_4g122060 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1580 14 16350673 16354671 Lal14g1580 14 16350673 16354671 ECH