Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1551 ATGATGCAATTGAAGATGACAGAGATGTGGACAACAATGGGGTCAACCTTAGCCAGTTTCATGTTTGTGTGGGCAATCATACGCCAATATTGTCCATATGAGGTAACACGTTTCTTTGAGAAGTACACACACAATACCATGGGATACTTCTACCCTTATATTAGAATATCCTTCCATGAATTCTTGGGAGACAGGTTGAAGAGAAGTGATGCCTATGCTGCTGTTGAGGCATACCTCAGTGCCAACACATCGAAGAGTGCTAAGAGGCTCAAAGCTGAGATGGGAAAAGATAGCACCAAGTTGGTTTTAACCATGGATGAGTATGAGAGAGTAACTGATGAGTACAAGGGTGTGAAAGTTTGGTGGGTGTGTAGCAAGGTTATGTCACCAACAAGGTCCATGTCTTATTATCAAGAACAAGAGAAGAGGTTCTATAAGCTGAGTTTTCATAAGAGGTATAGAGACATAATCAGTGGTTCATATTTGGAGCATGTGATGAGGGAAGGGAAGGAAATTCGTTTGAGGAACAGGCAAAGGAAGCTTTACACCAATAGTCCAGGTTATAAGTGGCCAAGTTATAAGCAAACTATGTGGAGTCATATTGTGTTTGAGCACCCCGCGACGTTCGAAACAATGGCCATAGAACCAGAGAAGAAGCGAGAGATCATTGAGGATTTGGTTACTTTCAGCAAGAGTAAGGAGTTTTATGCGAGGATCGGGAAGGCGTGGAAGAGGGGTTATCTTCTTCATGGCCCTCCTGGTACAGGTAAGTCCACTATGATTGCAGCAATGGCTAATTTGTTGGCATATGATGTCTATGACTTGGAGCTCACTGCAGTGAAGGACAACACTGAGCTGAGGAAGCTTTTGATTGAGACAACTAGTAAGTCTATAATTGTTATCGAGGATATCGATTGTTCACTTGATCTTACAGGCCAGAGGAAGAAAAAGGGAGATAAGTTCTCAGATGATGAGAGTGATAAGTTGAATTCAGAAGCCGGTTTAAGGAAGGAAGCGAAGGAAGAAGGAAGTAGTGGCAGCAAAGTGACACTTTCAGGGCTATTGAATTTCATAGATGGGATATGGTCTGCATGTGGAGGGGAGAGGTTGATTGTTTTCACAACTAACTATGTGGAGAAGCTTGACCCAGCACTCATCAGAAGGGGTAGAATGGACAAACATGTTGAGCTTTCTTATTGTACTTTTGAAGGGTTTAAAGTGCTTGCTAATAATTACTTGAAGATTGAGACTCATTCAATGTTTGATACAATTAAGAGGCTGATAAGTGAGGTTAAGATTACACCAGCTGATGTTGCTGAAAACCTTATGCCAAAGTCTCATATGGATGATGCAGATAAGTGTCTTTCTAACTTGATTGAAGCACTTGAGGCTACAAAAGATGAGGAGCTGTTGAGCCTGAGACAGAGTAGTCCCATCAAGCAAGATGAGAAACTCAAGCATGGCAGTCACATCAAGGAAAATGGTCAGTTACATGAGGACAATGAAAGTGACCAAGCATTGAACCAAAGCAGGTGA 1536 0.4199 MMQLKMTEMWTTMGSTLASFMFVWAIIRQYCPYEVTRFFEKYTHNTMGYFYPYIRISFHEFLGDRLKRSDAYAAVEAYLSANTSKSAKRLKAEMGKDSTKLVLTMDEYERVTDEYKGVKVWWVCSKVMSPTRSMSYYQEQEKRFYKLSFHKRYRDIISGSYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAIEPEKKREIIEDLVTFSKSKEFYARIGKAWKRGYLLHGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKFSDDESDKLNSEAGLRKEAKEEGSSGSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHVELSYCTFEGFKVLANNYLKIETHSMFDTIKRLISEVKITPADVAENLMPKSHMDDADKCLSNLIEALEATKDEELLSLRQSSPIKQDEKLKHGSHIKENGQLHEDNESDQALNQSR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1551 511 SMART AAA_5 243 401 IPR003593 -
Lal14g1551 511 ProSitePatterns AAA-protein family signature. 369 388 IPR003960 GO:0005524|GO:0016887
Lal14g1551 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 462 IPR027417 -
Lal14g1551 511 Gene3D - 203 394 IPR027417 -
Lal14g1551 511 CDD AAA 244 399 - -
Lal14g1551 511 Gene3D - 395 472 - -
Lal14g1551 511 PANTHER ATP BINDING PROTEIN 7 487 - -
Lal14g1551 511 MobiDBLite consensus disorder prediction 472 511 - -
Lal14g1551 511 Pfam ATPase family associated with various cellular activities (AAA) 248 398 IPR003959 GO:0005524|GO:0016887
Lal14g1551 511 PANTHER BCS1 AAA-TYPE ATPASE 7 487 - -
Lal14g1551 511 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Lal14g1551 511 MobiDBLite consensus disorder prediction 479 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1551 Lal-Chr14 16191605 16193140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1551 208 397 Miscellaneous Gene Families AT5G58870 29.798 4.68e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1551 - - lang:109362861 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1551 14 16191605 16193140 Lal14g1551 14 16191605 16193140 ECH
Lal14g1551 14 16191605 16193140 Lal7g0947 7 15820561 15822096 LSH