Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1549 ATGAATCATAAGAGTCTGAATATAGGAACAGAGAATGAGATATACATTCCAGAGCAATGGTCTCTTGCAGCAGACTCAATTGCGTACGATTCAATCACATCGCCACCTCCCATTATTCTCGTTTGCGGCCCCGGCAACTGTGGCAAGACAACATTCTCCCGCCATCTCCTAAACGTGATGCTACAAAGATATAAGAAAGTTGTTTATCTTGATACTGATGTTGGTCAACCCGAATTTACCCCTCCTGGTTTTCTATCACTCACCGTTCTTCATGAACTAACACCAAATTTGATGATTCCATGCCTGAAAACACCAGAGAGGTACGAACTGCTTTCTGTACCAATCATTAGATTTAGATGCCTTTTCTTTGGCGATGTTTCTTCAAAAAGAGATCCATCAATTTACTTAAAGTACATATTTGCCTTGTATGATTATTATCGAAAAGAGTATTGCATTTCTGAGAAGGGAGAAAACCCTCCTATGACTGAGTTGCCACTTATTGTGAACACTTCTGGCTGGGTGAAGGGTGTTGGTTATGCTATGTTAGTGGACATGTTGAAGTATATTGGTCCCACACACGTAGTTAAGATAAACATATCTGCTGAAATTAAGAATCTGCCTGCTGGAGCATTCTGGTCAGATGGGGGAAATGACGGAACTGTCAACTTAGTCGAGATAAATTCTGCTCGTCAGGATTCATTCAATAGATCGGTACTTGTTCAGAAGGATGCACGTCTCTTGCGTGATTTACGAATAACGGCTTATTTCAGACAATGTCTTCCCAGGGATTTCACTATTACAACAATCAAGGAACTTGCACATGCACTGACCTCTCACTGTCCCTGTGAAGTTCCCATTGCAAGCATCAAGATCAAACATCTTCACTGTGAGGTCCCGAATTCTGAAATATTCTACAGTTTGAATGCTAGCATTGTTGGCTTAGCAGTTGATTCTGGAGATTCTGAAAATTTGCCTTGGTGTGTTGGTCTTGGTATTGTACGAGGCATTGATACATTCAAAGGTGTGCTCTTTGTGATTACACCCGTGCCACGAAGTTCTCTGCAAAAAGTCAACCTCTTGCTACAGGGTTATATCCAAATTCCTACTTCTTTATTGCAGCTTTTCATGTTTTCTGAATCTGCCCTTGTTTCTAGTGTTCCTATCATGGGATGGTGGATTGGTCTTGAACAAGGACTGATAGAAATTGATGAAGATATTCCTTTTGCTATTTCCGTTTTATAA 1242 0.4066 MNHKSLNIGTENEIYIPEQWSLAADSIAYDSITSPPPIILVCGPGNCGKTTFSRHLLNVMLQRYKKVVYLDTDVGQPEFTPPGFLSLTVLHELTPNLMIPCLKTPERYELLSVPIIRFRCLFFGDVSSKRDPSIYLKYIFALYDYYRKEYCISEKGENPPMTELPLIVNTSGWVKGVGYAMLVDMLKYIGPTHVVKINISAEIKNLPAGAFWSDGGNDGTVNLVEINSARQDSFNRSVLVQKDARLLRDLRITAYFRQCLPRDFTITTIKELAHALTSHCPCEVPIASIKIKHLHCEVPNSEIFYSLNASIVGLAVDSGDSENLPWCVGLGIVRGIDTFKGVLFVITPVPRSSLQKVNLLLQGYIQIPTSLLQLFMFSESALVSSVPIMGWWIGLEQGLIEIDEDIPFAISVL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1549 413 PANTHER CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P 12 374 IPR045116 GO:0006396|GO:0051731
Lal14g1549 413 PANTHER OS01G0354700 PROTEIN 12 374 - -
Lal14g1549 413 Gene3D - 13 260 IPR027417 -
Lal14g1549 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 93 IPR027417 -
Lal14g1549 413 Pfam mRNA cleavage and polyadenylation factor CLP1 P-loop 43 257 IPR032319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1549 Lal-Chr14 16178482 16182043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1549 K06947 - gmx:100775314 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1549 14 16178482 16182043 Lal14g1549 14 16178482 16182043 ECH