Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1495 ATGAATCGCGTGAAAGCAATTACAGCTTCTCTCAGAAACCTTGACACGTCACTCGCTACACGAGTTCTCGCAACTCGGTCCCTCCATCTCACTCGGAACCAGGTGACTCACTTCACTCCCCATTCTCCACCACCCCTTTTGGCTCCCCTTCACAATTTTTGTTTTTTCCAAAAAATCTACTTTTCTTCCAAACCCAATTCCATTGTGGAGCTTGTTTTAACCAACGATTGGTCCCAAGATTTAGAGATCGAGTTAGAAAAATGTTCCCCATCTCTGACCCATGAGACTGTTCTTTACGTTTTGAAGAGATTGGATAAAAACCCTGAAAAAGCTTCCAACTTTTTCAATTGGGTCAGTGAGAAAGAGTGTTTTACACCAAGTTCATCACTGTATAGCTTAATTGTTAGGATCTTATCATATAAGGAGATGATGAAACAGTTTTGGATTACTCTAAGGGTGATGAAGGAAAAAGGATTTCATCTTGATGAAGAGACGTACTATACAATTCTAATTGGTTTTAAAAAGGCAAAGCTGAATAGTGATGCGGTTGCGCTGACCAATTTCTATGATCGGATGCTTCAGGATAATGCAATGCAAAGTAATGTCACAAAGGTGGTTGATATCATTAAAGGGTCAGAATGGAATGATGCGATTACGAATGAGTTGGCAAAGGTTAAACTTCAACTGTCTGATAATTTTGTTATAAGGGTTTTGAGAGAGCTTCGAATTCATCCTTTAAAGGCTTATAAGTTCTTTCGTTGGGTTGGGAAGCAATCTGGTTATGAGAACAATACAGTAACGTATAATGCAATTGCAAGAGTGCTCGCGAGGGAGGAATCAATTGAGGAGTTTTGGAATATTATCGAGGAGATAAAGAGTGTAGGTCATGAATTGGATATCGACACTTACATAAAAGTATCAAGGCAGCTTCAAAAGAATAAGTTGATGGAGGATGCTGTGAAGCTTTATGAGCTTATGATGGATAGCTCATATAAGCCATCAATTCAGGATTGCAGTATGCTTTTGAAGAGTATCTCTTTGGGCGATAAGCCAAACCTGGATTTGGTTTTCAGGGTAGCAAAGAAATATGAGTCAACCGGGCATACTCTCTCGAAGGCAATCTATGATGGAATTCATAGGTCATTGACAAGTGTTGGGAAATTTGACGAAGCTGAAAATATTGTCCGGACTATGAGAAATGCTGGTTTTGAGCCTGATAACATCACCTACAGTCAAGTGGTTTTTGGACTTTGTAAAATGAAGAGGTTTGAAGAAGCATGTAAGGTGCTGGAGGAGATGGAATCTTCTGGGTGCATCCCTGATATCAAGACTTGGACCATCTTGATCCAAGGGCATTGTGCAGGGAATGAAGTAGATAAGGCATTACTTTGTTTTGCTAAGATGATTGAAAAGGGATGCGATGCAGATGCTGATTTGTTGGAAGTTCTGCTTGATGGTTTTCTTAATCAAAATAGAATAGATGGTGCTTACAAGTTGCTTGTAGAGGTAAGTAGCAAGTGCCGTATATCTCCATGGCAAGCTACATATAAGAAGCTGATTGAAAAGCTGTTAGGAGTCCAGAAGTTTGAGGAGGCACTTGATGTTCTTAGTTTGATGAAGAAACACAACTACCCTCCTTTCCATGAACCCTTTATGTCTTATATTTCGAAGTTTGGGACGGTGGAGGATGCTGCGGAATTCCTGAAGGCATTGAGTTCAAAAAGTTACCCAGCCGAAGCAGTTTACTTCAAGGTTTTTGAGTCCTTATTCAAAGAAGGTAGACACTCTGAAGCCAAAGATCTATTGTACAAGTGTCCTCATCATATACGTAATCATAAAAAAATCTCTGAACTGTTTGGCTAA 1863 0.3972 MNRVKAITASLRNLDTSLATRVLATRSLHLTRNQVTHFTPHSPPPLLAPLHNFCFFQKIYFSSKPNSIVELVLTNDWSQDLEIELEKCSPSLTHETVLYVLKRLDKNPEKASNFFNWVSEKECFTPSSSLYSLIVRILSYKEMMKQFWITLRVMKEKGFHLDEETYYTILIGFKKAKLNSDAVALTNFYDRMLQDNAMQSNVTKVVDIIKGSEWNDAITNELAKVKLQLSDNFVIRVLRELRIHPLKAYKFFRWVGKQSGYENNTVTYNAIARVLAREESIEEFWNIIEEIKSVGHELDIDTYIKVSRQLQKNKLMEDAVKLYELMMDSSYKPSIQDCSMLLKSISLGDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSVGKFDEAENIVRTMRNAGFEPDNITYSQVVFGLCKMKRFEEACKVLEEMESSGCIPDIKTWTILIQGHCAGNEVDKALLCFAKMIEKGCDADADLLEVLLDGFLNQNRIDGAYKLLVEVSSKCRISPWQATYKKLIEKLLGVQKFEEALDVLSLMKKHNYPPFHEPFMSYISKFGTVEDAAEFLKALSSKSYPAEAVYFKVFESLFKEGRHSEAKDLLYKCPHHIRNHKKISELFG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1495 620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 371 405 IPR002885 -
Lal14g1495 620 TIGRFAM PPR: pentatricopeptide repeat domain 408 442 IPR002885 -
Lal14g1495 620 TIGRFAM PPR: pentatricopeptide repeat domain 444 476 IPR002885 -
Lal14g1495 620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 299 333 IPR002885 -
Lal14g1495 620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 441 475 IPR002885 -
Lal14g1495 620 Pfam PPR repeat family 416 453 IPR002885 -
Lal14g1495 620 Gene3D Tetratricopeptide repeat domain 209 348 IPR011990 GO:0005515
Lal14g1495 620 Gene3D Tetratricopeptide repeat domain 78 208 IPR011990 GO:0005515
Lal14g1495 620 Gene3D Tetratricopeptide repeat domain 378 509 IPR011990 GO:0005515
Lal14g1495 620 PANTHER OS01G0970900 PROTEIN 1 620 - -
Lal14g1495 620 PANTHER OS01G0970900 PROTEIN 1 620 IPR044578 GO:0008380
Lal14g1495 620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 406 440 IPR002885 -
Lal14g1495 620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 264 298 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1495 Lal-Chr14 15876332 15878194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1495 357 602 Miscellaneous Gene Families AT4G11690 25.600 7.88e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1495 - - gmx:100815857 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1495 14 15876332 15878194 Lal14g1495 14 15876332 15878194 ECH