Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1279 ATGCTACATCTATCATGCAACAGTAGTAATGGTAATTACTATCTTCACCTTGCACTTGTCTTCATCTCATGCGTCGGTTTGATCGTAGCACTCAAACACTTCATCACCATTTCGAAATGGATCTTTAACACTTTCTTCAGATCCGAGAAAGACTTCATCACAAGTTATGGTTCATGGGCTCTGGTCACCGGAGCCACCGACGGCATCGGAAAAGCCTTCGCATACCAGCTAGCACAGAGAGGGCTCAACCTTGTTCTCATCAGTAGAAGCTGCCAGAAGCTTGAAACTGTTGCAGGTGAAATCAAAGGGAAACACCCTCATACCAAGATCAAGTTCATCGAGATAGATTTTTCAGGCGACATCTCGGTGGGTCTCCGGCGAATAGTGGAGGTGATTCAAGACTTAGATCTTGGCATTGTGATCAACAATGTAGGGATCACGTACCCCAAGGCCATGTTTTTTCATGAGGTAGAAGAAAAAGTGTGGATGGACATAGTGAAAGTGAACATTGAAGGTACAACTAGAGTAACAAAAGCTGTTCTACCAATAATGATTCAAAGGAAAAGAGGTGCAATCGTTAACATTGGTTCTGGTGCTGCCGTGGTTGTTCCTTCTCATCCTCTCTATACCATCTATGCTGCTACAAAGGCTTACGTGGATCAATTATCAAGATCTCTCTATGTGGAATATAGACATTATGGGATCCACGTGCAATGTCAGGTGCCCCTTTATGTTGCAACAAATATGGTATCAAAGGTAGCATCTATTAAGAGAGACTCATTTTTCATACCAACACCTGAGGGATATGCAAGAGCTGCAATTGGAGAAATTGGGTATGAACAAAGATGCACACCTTATTGGTCTCACTCTATTCAATGGTACTTCGCACGCTTAATCCCAGATCCACTACTTGATGCTTGGCGCTTGTCGATTGGCATTCGCCGTAGAAATGAGCGAATATCTTCTATACCATAA 975 0.4297 MLHLSCNSSNGNYYLHLALVFISCVGLIVALKHFITISKWIFNTFFRSEKDFITSYGSWALVTGATDGIGKAFAYQLAQRGLNLVLISRSCQKLETVAGEIKGKHPHTKIKFIEIDFSGDISVGLRRIVEVIQDLDLGIVINNVGITYPKAMFFHEVEEKVWMDIVKVNIEGTTRVTKAVLPIMIQRKRGAIVNIGSGAAVVVPSHPLYTIYAATKAYVDQLSRSLYVEYRHYGIHVQCQVPLYVATNMVSKVASIKRDSFFIPTPEGYARAAIGEIGYEQRCTPYWSHSIQWYFARLIPDPLLDAWRLSIGIRRRNERISSIP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1279 324 PANTHER RH59310P 18 320 - -
Lal14g1279 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 146 IPR002347 -
Lal14g1279 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 198 IPR002347 -
Lal14g1279 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 212 231 IPR002347 -
Lal14g1279 324 PRINTS Glucose/ribitol dehydrogenase family signature 59 76 IPR002347 -
Lal14g1279 324 PRINTS Glucose/ribitol dehydrogenase family signature 135 146 IPR002347 -
Lal14g1279 324 PRINTS Glucose/ribitol dehydrogenase family signature 184 200 IPR002347 -
Lal14g1279 324 PRINTS Glucose/ribitol dehydrogenase family signature 212 231 IPR002347 -
Lal14g1279 324 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Lal14g1279 324 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 18 320 - -
Lal14g1279 324 PIRSF 11-beta-HSD1 10 322 - -
Lal14g1279 324 CDD 17beta-HSD1_like_SDR_c 57 300 - -
Lal14g1279 324 Pfam short chain dehydrogenase 59 253 IPR002347 -
Lal14g1279 324 Gene3D - 53 286 - -
Lal14g1279 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 310 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1279 Lal-Chr14 14536085 14540798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1279 5 317 Lipid Metabolism Gene Families AT1G24470 55.732 2.90e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1279 K10251 - qsu:112015935 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1279 14 14536085 14540798 Lal17g1652 17 17791683 17796129 PCT