Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0892 ATGTTGCATTCTTTCACAACTTGCTTCACCTTTCTTTATAGGAAGGTTAAATCCCTCTTCAACCAGAAAAGAACTAGACCCAAAAACACTTTCTCTTCCACTCTTGACTTTTCATCAACCTCTTCATTCCTTCACATGAAAGTAACTAGCCAGTTGAAGCAAGTTTTCAAGGTTATTGACACAAATGGTGATGGAAAGTTATCAACCACTGAGTTAAGTAAAATGCTTACATGCTTAGGAGGATACAACAAATGCATGGCTGCTAAAGAAGCTGAAAGTATGGTAAAAGTGTTGGACTTCAATGGAGATGGGTTTGTAGACTTGGATGATTTCATGGTTTTCATGAATAATAATGAAAAAGAAGATGAAAGAAAAGACAAAGATGATTATCTTATGGATGCTTTTCTTGTATTTGATACTGACAATAATGGTTTAATCTCACCTAAGGAACTACAAAGAGTTTTGCTCATTCTAGGGTTTGATAATTGCAGTGTTAGAGAATGCAAGCTAATGATCAAAGGAGTTGACAAAAATGGAGATGGTTTTGTGGATTTTGAAGAATTTAGATCCATGATGAATACATGA 585 0.347 MLHSFTTCFTFLYRKVKSLFNQKRTRPKNTFSSTLDFSSTSSFLHMKVTSQLKQVFKVIDTNGDGKLSTTELSKMLTCLGGYNKCMAAKEAESMVKVLDFNGDGFVDLDDFMVFMNNNEKEDERKDKDDYLMDAFLVFDTDNNGLISPKELQRVLLILGFDNCSVRECKLMIKGVDKNGDGFVDFEEFRSMMNT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0892 194 Gene3D - 4 126 - -
Lal14g0892 194 ProSiteProfiles EF-hand calcium-binding domain profile. 163 194 IPR002048 GO:0005509
Lal14g0892 194 CDD EFh 51 115 IPR002048 GO:0005509
Lal14g0892 194 ProSitePatterns EF-hand calcium-binding domain. 99 111 IPR018247 -
Lal14g0892 194 ProSiteProfiles EF-hand calcium-binding domain profile. 47 82 IPR002048 GO:0005509
Lal14g0892 194 CDD EFh 130 192 IPR002048 GO:0005509
Lal14g0892 194 PANTHER CALCIUM BINDING PROTEIN 34 193 - -
Lal14g0892 194 SMART efh_1 51 79 IPR002048 GO:0005509
Lal14g0892 194 SMART efh_1 167 194 IPR002048 GO:0005509
Lal14g0892 194 SMART efh_1 130 158 IPR002048 GO:0005509
Lal14g0892 194 SMART efh_1 90 118 IPR002048 GO:0005509
Lal14g0892 194 Pfam EF-hand domain pair 50 115 IPR002048 GO:0005509
Lal14g0892 194 Pfam EF-hand domain pair 130 192 IPR002048 GO:0005509
Lal14g0892 194 Gene3D - 127 194 - -
Lal14g0892 194 ProSiteProfiles EF-hand calcium-binding domain profile. 126 161 IPR002048 GO:0005509
Lal14g0892 194 SUPERFAMILY EF-hand 42 193 IPR011992 -
Lal14g0892 194 ProSitePatterns EF-hand calcium-binding domain. 176 188 IPR018247 -
Lal14g0892 194 ProSitePatterns EF-hand calcium-binding domain. 139 151 IPR018247 -
Lal14g0892 194 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 34 193 - -
Lal14g0892 194 ProSitePatterns EF-hand calcium-binding domain. 60 72 IPR018247 -
Lal14g0892 194 ProSiteProfiles EF-hand calcium-binding domain profile. 86 121 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0892 Lal-Chr14 11309282 11309866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0892 19 192 EF-hand Containing Proteins AT1G24620 39.106 4.13e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0892 - - gmx:100779339 246.128