Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0881 ATGTCGTTCTCTGATTCCGAGACTTCCACTGAGTACAAGCCTTTCAAGCAAATAAGCCGTGATCGGTTATTGTACGAAATGCTTAGATCGGCAAGGTCCGGGGATTCGAAAGCATGGAAGGTGCTTATAATGGATAAAGTCACTGTCAAAGTTATGTCACATTCATGTAAAATGGCAGATATTACTGACCAAGAAGTTTCCTTGGTGGAAGACCTTTTCCGGCGAAGGCAACCATTACCATCTATGGATGCTGTTTATTTCATCCAGCCTTCTAAAGAGAAAGCCTACGTATTTTTTAGTTCACCAATCCCAAAGGAACTTGTAAACCATATCAAGAGTGATACAAGTGTCTTACCCCGCATAGGTGCATTGAGAGAGATGAATTTGGAATACTTCCCAATAGATAGCCAGGCGTTTATCACTGATCAAGATACAGCACTGGAAGAACTTTATGGCAATATAGAGAATACTCGCAGATTTAATACCTCGATGAATAATATGGCAATTCGAATAGCTACAGTATTTGCTTCATTGAAGGAACTACCGAATGTGTGGTATCGTGCTGCAAAGGATAGTGACGAGTCTACACCATTTTCAGCTCGTGAATTAGTTCCTACCAAGCTTGCTGATGCTGTTTGGGACATGGTTTCTAAATATAAGTCTACTATTCCCAACTTTCCACAAAACGAAACATGTGACCTCCTCATTGTTGATAGATCAATGGATCAGATTGCTCCAGTAATTCATGAATGGACCTACGATGCTATGTGCCATGATTTGTTGAATATGAGCGGAAATAAATATATGCATGATGTCCCCAGCAAAACAGGGGGTCAACCTGAGCAAAAGGAGGTCCTTCTAGAAGACCATGATCCAGTGTGGCTTGAACTTCGCCATACACATATAGCAGATGCTAGTGAAAGACTGCACGAAAAGTTTACCAACTTCGTGTCAAAGAACAAAGCTGCACAAATCCAACAGAGTGGAAGAGATGGCAGTGAGTTATCTACACGTGATTTGCAAAAAATGGTTCAGGCATTGCCCCAATATACTGAGCAAGTGGAGAAGATTTCGCTCCATGTAGAGATAGCTGGAAAGATAAACAAAATTATCAGAGAAACTGAACTTAGAGAGCTCGGACAGTTGGAACAAGATCTTGTTTTTGGAGATGCTGGAGCTAAGGACGTTATTAACTTCTTAAGAACAAAGCAGAATACAAATCCTGAATATAAGTTGCGGTTGTTGATGATTTATGCATCAGTCTATCCGGAAAAGTTTGAGGGTGATAAAGCTACAAAGCTAATGCAGTTGGCAAAACTATCACCTGATGACATGAAAGTTATCAGTAATATGCAATTGTTGGCGGGATCATCAAACAAAAAGTCACCTGCTACTGGTAGTTTCTCACTCAAGTTCAGTAACCAGAAGACAAAGCAAGCAGCACGCAAAGATCGTACTGAAGAAGAAGAAGAAACATGGCAACTATTTCGATTTTATCCCATGATAGAGGAGCTTATTCAAAATCTCAATAAGGGTGAATTACCAAAGAGTGACTACTCATGTAAAAACGAGCCAAGTCCTATTGTCACAGAGGGCTCTGTTAGAAACAAACAACGCACCCAGACGGCTCCAACTACTGCTCCTCATTCGATGAGATCTAGGAGAACAGCAAACTGGGCGCGGCCTCGTTCTTCCGATGATGGATACTCAAGTGACTCCACGTTGAAGAATGTGACTTCTGATTTCAAGAAGATGGGAAAGCGAATCTTTGTGTTTATTATTGGAGGAGCAACTAGATCCGAGCTACGTGTTTGCCACAAAATGACAACAAAACTAAAGAGGGAAATAATCCTAGGTTCTTCTTCTATTGATGATCCTCCACAATTTCTTACGGTAACAAGTCCTTCTTATTCACCTTTTCAATTTCTCTCACAATGA 1938 0.4076 MSFSDSETSTEYKPFKQISRDRLLYEMLRSARSGDSKAWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPSMDAVYFIQPSKEKAYVFFSSPIPKELVNHIKSDTSVLPRIGALREMNLEYFPIDSQAFITDQDTALEELYGNIENTRRFNTSMNNMAIRIATVFASLKELPNVWYRAAKDSDESTPFSARELVPTKLADAVWDMVSKYKSTIPNFPQNETCDLLIVDRSMDQIAPVIHEWTYDAMCHDLLNMSGNKYMHDVPSKTGGQPEQKEVLLEDHDPVWLELRHTHIADASERLHEKFTNFVSKNKAAQIQQSGRDGSELSTRDLQKMVQALPQYTEQVEKISLHVEIAGKINKIIRETELRELGQLEQDLVFGDAGAKDVINFLRTKQNTNPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLAGSSNKKSPATGSFSLKFSNQKTKQAARKDRTEEEEETWQLFRFYPMIEELIQNLNKGELPKSDYSCKNEPSPIVTEGSVRNKQRTQTAPTTAPHSMRSRRTANWARPRSSDDGYSSDSTLKNVTSDFKKMGKRIFVFIIGGATRSELRVCHKMTTKLKREIILGSSSIDDPPQFLTVTSPSYSPFQFLSQ 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0881 645 Gene3D - 132 630 IPR027482 -
Lal14g0881 645 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 16 631 IPR001619 GO:0016192
Lal14g0881 645 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 250 372 IPR043127 -
Lal14g0881 645 MobiDBLite consensus disorder prediction 458 487 - -
Lal14g0881 645 PIRSF VPS45_Sec1 10 641 IPR001619 GO:0016192
Lal14g0881 645 MobiDBLite consensus disorder prediction 523 553 - -
Lal14g0881 645 SUPERFAMILY Sec1/munc18-like (SM) proteins 17 631 IPR036045 -
Lal14g0881 645 MobiDBLite consensus disorder prediction 517 573 - -
Lal14g0881 645 Gene3D - 7 126 IPR043154 -
Lal14g0881 645 PANTHER PROTEIN TRANSPORT SEC1A 16 631 - -
Lal14g0881 645 Pfam Sec1 family 40 630 IPR001619 GO:0016192
Lal14g0881 645 MobiDBLite consensus disorder prediction 458 476 - -
Lal14g0881 645 Gene3D - 373 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0881 Lal-Chr14 11195522 11206658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0881 K15292 - gmx:100787667 1113.21