Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0225 ATGGATTCTTGGGTTAGGGTGTTACTTTTCATTGCTTTCATTCTTCCAGCTTTGGTTGAGTGCAGAGTAAGGCACTACAAATTCAATGTGGTAAACAAGAATATTACTCGATTATGTTCAAGCAAATCCATTATTACAATTAATGGGAAGTTCCCAGGACCCACACTTTATGCCAGGGAAGATGATACAGTGCTCATCAGAGTCATCAACAAAGTTAACCACAACGTCACCATCCATTGGCATGGGATTAGACAAGTGCGAACGGGTTGGGCTGATGGACCAGCATATGTGACACAATGCCCAATTGAACCAGGACATTCCTATTTGTACAACTTCACCATTACAGGACAAAGAGGAACACTTCTTTGGCATGCACATGTTAACTGGTTAAGGTCAACTGTCCATGGTGCCATAGTTGTCTTGCCAAAGCATGGTGTACCTTATCCTTTTCCTAAGCCAGATGATGAATTGATTTTGGTATTAGGAGAATGGTGGAAATCAGATACCGAAGCTGTTATCAATGAAGCTTTGAATTCAGGATTGGCACCAAATGTCTCAGACTCTCATACCATCAATGGCCTTCCAGGGACAGTTGCCAATTGTTCTACACAGGATGTTTACAACCTAGCAGTGGAAAGTGGCAAGACATACCTGCTTAGAATTATCAATGCTGCACTCAATGAAGAGCTCTTCTTCAAAATTGGTGGCCATAATCTCACAGTAGTAGAAGTAGATGCAACATATATAAAGCCATTCAAAATTGAAACAATTGTAATAGCACCTGGCCAAACAACCAATGTACTTTTAACTGCTAACCAAAAATCTGGCAAATACTTAGTAGCAGCTTCTCCTTTCATGGATGCACCTATTGCTGTAGACAATTTTACTGCTACAGCTACATTGCACTACACTGGAACACTTTCAAATACTCCTACATTTCTCACTACAACTCCTCCAAAAAATGCTACCCAAGTTGCTAATAACTTTATCAACTCTCTTAAAGGCCTTAATTCACAGAAATACCCTGTTAATGTGCCTCTAAAAGTTGATCATTCACTTTTTTTTACCATTGGGTTAGGAATTAAGCCTTGCCCATCTTGTAAAGCTGCAAATGGAAGCAGAGTTGTGGCTTCTGTTAATAATGTGACATTTATTATGCCAAGTATTGCATTACTTCAAGCACATTATTTCAACATCAATGGTGTGTTTACTACAGATTTTCCTCCTAACCCTGTTCATGTTTTCAACTACTCTGGTGCTGGACCTGCAAATTTAGTGACTCAAAGTGGCACTAAACTTTATAGACTAGAGTTCAATTCGACGGTTCAACTTGTTATACAAGATACTGGGATCATTGCACCTGAGAATCATCCAGTTCATTTACATGGGTTCAATTTCTTTGTTATTGGTAGAGGAGTGGGAAATTATAATCCCAAAATTGATGCTAAGAACTTTAACCTTCATGATCCTGTTGAAAGGAACACAGTTGGAGTTCCAGCTGGAGGATGGACCGCCATTAGATTCAGAGCAGATAATCCAGGAGTTTGGTTCCTTCACTGCCATTTAGAAGTGCACACAACATGGGGGCTAAAGATGGCATTTTTGGTGGAAAATGGAAAAGGTTCTAAACAATCATTGATACCACCACCAAAAGATCTTCCAAAATGTTGA 1671 0.395 MDSWVRVLLFIAFILPALVECRVRHYKFNVVNKNITRLCSSKSIITINGKFPGPTLYAREDDTVLIRVINKVNHNVTIHWHGIRQVRTGWADGPAYVTQCPIEPGHSYLYNFTITGQRGTLLWHAHVNWLRSTVHGAIVVLPKHGVPYPFPKPDDELILVLGEWWKSDTEAVINEALNSGLAPNVSDSHTINGLPGTVANCSTQDVYNLAVESGKTYLLRIINAALNEELFFKIGGHNLTVVEVDATYIKPFKIETIVIAPGQTTNVLLTANQKSGKYLVAASPFMDAPIAVDNFTATATLHYTGTLSNTPTFLTTTPPKNATQVANNFINSLKGLNSQKYPVNVPLKVDHSLFFTIGLGIKPCPSCKAANGSRVVASVNNVTFIMPSIALLQAHYFNINGVFTTDFPPNPVHVFNYSGAGPANLVTQSGTKLYRLEFNSTVQLVIQDTGIIAPENHPVHLHGFNFFVIGRGVGNYNPKIDAKNFNLHDPVERNTVGVPAGGWTAIRFRADNPGVWFLHCHLEVHTTWGLKMAFLVENGKGSKQSLIPPPKDLPKC 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0225 556 PANTHER LACCASE 4 556 - -
Lal14g0225 556 CDD CuRO_3_LCC_plant 402 539 IPR034289 GO:0005507
Lal14g0225 556 ProSitePatterns Multicopper oxidases signature 1. 514 534 IPR033138 -
Lal14g0225 556 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Lal14g0225 556 Pfam Multicopper oxidase 156 305 IPR001117 -
Lal14g0225 556 SUPERFAMILY Cupredoxins 16 167 IPR008972 -
Lal14g0225 556 PANTHER MULTI-COPPER OXIDASE 4 556 IPR045087 -
Lal14g0225 556 Pfam Multicopper oxidase 412 539 IPR011706 GO:0005507|GO:0016491
Lal14g0225 556 SUPERFAMILY Cupredoxins 346 556 IPR008972 -
Lal14g0225 556 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Lal14g0225 556 ProSitePatterns Multicopper oxidases signature 2. 519 530 IPR002355 GO:0005507
Lal14g0225 556 TIGRFAM laccase: laccase 21 556 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lal14g0225 556 Gene3D - 153 338 IPR008972 -
Lal14g0225 556 SUPERFAMILY Cupredoxins 150 316 IPR008972 -
Lal14g0225 556 CDD CuRO_2_LCC_plant 159 303 IPR034285 -
Lal14g0225 556 Gene3D - 365 556 IPR008972 -
Lal14g0225 556 Gene3D - 17 142 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0225 Lal-Chr14 2625641 2632752 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0225 K05909 - gmx:100779825 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0225 14 2625641 2632752 Lal14g0225 14 2625641 2632752 ECH