Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0171 ATGGATGTAAAAACAGGTTCTAGTGATATTATTGGTTTGGATGGTACTCTTTCTTCAACCCAGTTTTTCCTTTCTGCTCTTTCATTTTCAGATAACTGGAAAAGGTTCAATCCTTCTCTTCCTCCATGGATTTGGGTCCAATTTCCAAAACATCGTTTCATATCTTCACATAATAAGGTCTTTGAAGGATACTTATCACTCGAGAACATGTGCTTTAACAATTTAACTCAGAAGTATCTCTCAATTACTGAAGAGAATCCTTATTCGCAGAAGTATCTTTCCATTACTGAAGAGAATCCTTACTCCGTTGAAGAAGAGAGTAATAGAAGTTCGACTTCGAAAGAAGAGTGCAATACCTCACATGGAGAAGAAGAAGAAGAGCTCTTTGATTATGCCACTTTAGTTCAGAGCAATTGCAATGAAGTAAACCACTATGATTTTCATATTGTCTACAGTCCTTCATATAGAGTTCCAGTGCTGTATTTCCGTGCATGCCATAGCGATGGACAACCTTTATCGTTCGATGAAATTGAAAAGGACCTCCCGGGTCATTCTTCAAAGTTACTGTCAGAATCGAAATGGACATTCATAACTAATGAGGAGCATCCATATTTGAATAGGCCATGGTACAAATTACATCCATGTGGGACAAGTGATTGGATGAAGCTGCTATTCCAAAATGACACATCTTTGAATAAAAATGGTTTCGTTATTGAACAATATCTAGTTTCATGGTTCTCAGTCATAGGACAAGTAGTTGGTCTCAAAATTCCTTTGGGGATGATGGATACAAATGTTGCTAACCATTCTTAA 813 0.3702 MDVKTGSSDIIGLDGTLSSTQFFLSALSFSDNWKRFNPSLPPWIWVQFPKHRFISSHNKVFEGYLSLENMCFNNLTQKYLSITEENPYSQKYLSITEENPYSVEEESNRSSTSKEECNTSHGEEEEELFDYATLVQSNCNEVNHYDFHIVYSPSYRVPVLYFRACHSDGQPLSFDEIEKDLPGHSSKLLSESKWTFITNEEHPYLNRPWYKLHPCGTSDWMKLLFQNDTSLNKNGFVIEQYLVSWFSVIGQVVGLKIPLGMMDTNVANHS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0171 270 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 13 261 IPR007135 GO:0019787
Lal14g0171 270 Pfam Autophagocytosis associated protein, active-site domain 32 258 IPR007135 GO:0019787
Lal14g0171 270 MobiDBLite consensus disorder prediction 102 123 - -
Lal14g0171 270 MobiDBLite consensus disorder prediction 99 123 - -
Lal14g0171 270 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 13 261 - -
Lal14g0171 270 Gene3D - 74 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0171 K17888 - gmx:100808589 321.627