Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0166 ATGGCGATTACTGCATGGATGAAGAAGGTTGCATCCTCTTCTCCATTAATGCACCATTCTTCTTATAACCTCTTCTTCTTCCACCGAACCTTTTCAGTGAGTAGTGCACTTTCAGAACCAGTTCGTGTTCGTTTCGCACCTTCTCCTACCGGTAACCTCCATGTCGGTGGTGCCAGAACCGCCTTATTCAATTACTTGTTTGCTAGGTCCAAAGGTGGGAAATTTGTTTTGAGAATTGAGGATACTGACTTGGAGAGGTCTACCCGGGAATCCGAGGAAGCCGTGCTTCGAGACCTTTCTTGGCTTGGCCTTGATTGGGATGAAGGTCCTGGTGTTGGTGGGGATTATGGTCCATATAGGCAGTCTGAGAGGAATTCTTTGTATAAACAATATGCTGAGAAACTCCGTGAATCTGGTCATGTTTATTGCTGCTTCTGCTCTAATGAGGAACTAGAAAAAATGAAGGTGGTTGCCAAACTAAAGAACCTGCCTCCAGTATACACAGGCAAATGGGCTAGTGCAACTAATGAGGAAGTAGAAGAAGAGCTGGCAAAGGGAACTCCTTATACATACCGGTTTCGTGTCCCTGAAGGAAGTTTAAAAATTAATGACATAATACGAGGCGAAGTTAGTTGGAACTTGGCTACACTTGGAGATTTTGTGATAATGAGGAGTAATGGTCAGCCTGTTTACAACTTTTGTGTAACGGTGGATGATGCTACCATGTCTATTTCTCATGTTATCAGAGCAGAGGAGCATTTGCCAAACACTCTAAGGCAGGCATTGATATACAAGGCACTAGGATTTCCCATGCCTCACTTTGCACATGTTTCCTTGATTTTAGCTCCTGATCGCAGTAAATTATCAAAACGACATGGTGCAACATCAGTGAGTCAGTTCAGGGAGATGGGATACCTACCTCAAGCAATGGTGAACTACCTAGCATTATTAGGTTGGGGTGATGGGACCGAAAATGAGTTTTTCACCCTTGATCAACTTGTTGAAAAATTCACTATTGAACGTGTTAACAAAAGTGGCGCCGTTTTTGATTCGACGAAGTTAAGGTGGATGAATGGTCATTATTTAAGAGCACATCCAGCAGAGGAGTTCACAAACCTTATTGGAGAGCACTGGAAGACATCCGGCTTACTTACAGTTTTGGAAGGGCCCTTCATCGATGAAGCAGCTCAGCTACTTAAGGATGGGATTGACTTGATAACCGATTCAGAAAAAGTGCTTGCTAACTTGCTTTCTTATCCTTTACATTTAACTTTACAGAGCCAAGATGCAGAACCGGTCTTACAAGATAATCTTTCTGAATTTTCCGGCAGCCTCTTGGGTGCCTATGATAATGGTGATCTGGTATCTGCACTTGAAAGCCAAGCTAGCTGGCAAAAATGGGTGAAAGAATTTGGTAAATCACTTAACCGCAAGGGAAAATCGCTTTTCATGCCTATCCGACTTTTGCTGACCGGAAAACTTCATGGACCTGATCTGGGGGCTAGTGTTTTACTGCTCCATAAAGCTGGAACTACTGGTATCGTAGCTCCCGAAGTCGGCTTCGTGACACTGGATGAAAGATTCAAAATTCTTAGGCAAATTAACTGGGAAACATTGTCCAAGGATCATCCTATCAAAGAGACAGCTACTTCTGTGTAA 1659 0.4328 MAITAWMKKVASSSPLMHHSSYNLFFFHRTFSVSSALSEPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEAVLRDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYAEKLRESGHVYCCFCSNEELEKMKVVAKLKNLPPVYTGKWASATNEEVEEELAKGTPYTYRFRVPEGSLKINDIIRGEVSWNLATLGDFVIMRSNGQPVYNFCVTVDDATMSISHVIRAEEHLPNTLRQALIYKALGFPMPHFAHVSLILAPDRSKLSKRHGATSVSQFREMGYLPQAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAVFDSTKLRWMNGHYLRAHPAEEFTNLIGEHWKTSGLLTVLEGPFIDEAAQLLKDGIDLITDSEKVLANLLSYPLHLTLQSQDAEPVLQDNLSEFSGSLLGAYDNGDLVSALESQASWQKWVKEFGKSLNRKGKSLFMPIRLLLTGKLHGPDLGASVLLLHKAGTTGIVAPEVGFVTLDERFKILRQINWETLSKDHPIKETATSV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0166 552 Pfam Anticodon binding domain 388 509 IPR045462 -
Lal14g0166 552 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 47 58 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lal14g0166 552 SUPERFAMILY An anticodon-binding domain of class I aminoacyl-tRNA synthetases 350 509 IPR008925 GO:0000049
Lal14g0166 552 Pfam tRNA synthetases class I (E and Q), catalytic domain 41 356 IPR020058 GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 TIGRFAM gltX_bact: glutamate--tRNA ligase 41 509 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Lal14g0166 552 PRINTS Glutamyl-tRNA synthetase signature 44 56 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 PRINTS Glutamyl-tRNA synthetase signature 58 69 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 PRINTS Glutamyl-tRNA synthetase signature 73 86 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 PRINTS Glutamyl-tRNA synthetase signature 229 239 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 PRINTS Glutamyl-tRNA synthetase signature 245 253 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Lal14g0166 552 Gene3D - 423 513 IPR020751 -
Lal14g0166 552 PANTHER GLUTAMATE--TRNA LIGASE 37 533 - -
Lal14g0166 552 PANTHER GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED 37 533 - -
Lal14g0166 552 CDD GluRS_core 41 363 IPR033910 GO:0006424|GO:0008270
Lal14g0166 552 Gene3D HUPs 32 365 IPR014729 -
Lal14g0166 552 Hamap Glutamate--tRNA ligase [gltX]. 40 538 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Lal14g0166 552 SUPERFAMILY Nucleotidylyl transferase 41 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0166 Lal-Chr14 1760129 1768512 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0166 K01885 - gmx:100787983 924.85