Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0123 ATGGTCACAACTTTGAAATTCAGTCAAATCCTAGCAAAAGAGACAGAGTCATTCTACTTGAAGAAACATGAACTGCATAGTAACCTTGAAGAAACACAACAAATCCATGGCCATTTAATCAAAACATGTTTGAATTTAAGGTATCATAAACTCCCTTTTCCAGCACTTAAGTCCTATTCTAGTACTGCAGCAATTCAAAGCTTCTTAATAACATCTTACAACAACAACAATTGCCCACAAGATGCAGTAAAAATCTACGCCGATATGCGTAAAGACGATACCGAAGTGGACAATTTTATCATACCATCTGTTCTCAAAGCATGCTGTCTTATCCCTTCAACAATGCAAGGACAAGAGGTGCATGGTTTTGTGGTGAAAAGTGGATTTCATGGTGATGTTTTTGTCTGCAATGCATTAATCATGATGTATAGAGAGGTTGGAAACTTAGCATCTGCAAGACTATTATTTGATAAGATTGATAACAAAGATGTTGTTTCTTGGAGTACAATGATTAGGAATTATCATAGGAGTGGATTTCTTGATGAAGCATTGGATCTTCTTAGAGATATGCATATTATGAAAGTGAAGCCTAATGAAAGTGCAATGATAAGCATCATTCATGTCTTTGCAGAACTTGGTAATTTGAAATTAGGCAAAGCTGTGCATGCTTATGTCATGAGGAATAGGTACTATTATGTGAAATCAGAAGCTTCTTTAAGTACTTGTTTGATAGATATGCATGTTAAATGTTCAAATTTAGCTTATGCAAGAAGGCTTTTTGATGGTTTATCTGAGGCTAGTATCATTTCATGGACTGCTATGATTTCAGGCTACATTCATTTCAATCATTTATATGAAGGTGCAACACTTTTTTCAAAAATGCTAGAGGAGGGTATATTTCCAAATGAGATAACAATCCTTAGTTTAGTCAAAGAATGTGGCAATGCAAAAGCTCTAGAACTTGGTAAGTGGTTACATGCTTTCACTTTAAGAAATGGATTTACCATTTCATTGGTTTTAGCCACTGCTTTTATTGACATGTATGGCAAATGTGATGATGTTATAAGTGCAAGATCTGTTTTTGACAGCATCAAGAACAAAGACTTAACAATGTGGAGTGCCATGATTTCTACTTATGCACAAAAAAACTCTATAGATGAGGCATTTGATGCATTTGTCCAAATGAATGGCAATGGAATAAGGCCAAATGAGATAACCATAGTTAGCCTCATTGTACTATGTGCAAAATCTGGATCCCTTGAAATGGGTAGGTGGATTCATTCTTACATAGACAAGAAAGGAATCAAAGAGGATTTGATTCTGAAAACCTCTTTGGTGGACATGTATGCTAAGTGTGGAGACATAGATATGGCTTATAGAATCTTCAATGCAGCCACTAAAAGAGACATTTCAATGTTGAATGCTATGGTATCAGGTTTTGCAGTACATGGTCATGGTAATGCAGCATTGAAACTCCTTGGAAAAACAGAATCACTAGGACTTATCCCTAATGATATCACATTCATATCAGCTCTTCATGCTTGTAGCCATGCTGGATTGGTGCAACAAGGGAAAATGGTGTTTCATAAAATGGTTCATGATTTTGGTTTGGTGCCAAAAGTTGAACACTTTGGTTGTATGGTGGATCTTCTTGGCAGAGCTGGATTGCTTGATGAAGCTAAGGAACTAATCAAAGACATGCCTATTAGGCCAAATGTTGCTGTATTGGGATCTTTTCTAGCTGCATGCAAGCTTCACAAAAATGTGAACTTAGGAGAATGGGTTGCAAAACAATTTCTATCATTGGAACCACAAAAGTATGGATATAATGTTCTAATGTCAAATATATATGCAGAAGCAAATAGATGGAGTGATGTTGCTCATATAAGGAGAGGTATGAAAGATGTAGGAATTAGTAAAGAAGCAGGTGTTAGTTCCATTGAAATCAATGGTTCATTTCATGATTTCATAATGGGAGATAGGGATCATCCAGAATATCAAAACATTTATGAAATCATTGATTAG 2025 0.3565 MVTTLKFSQILAKETESFYLKKHELHSNLEETQQIHGHLIKTCLNLRYHKLPFPALKSYSSTAAIQSFLITSYNNNNCPQDAVKIYADMRKDDTEVDNFIIPSVLKACCLIPSTMQGQEVHGFVVKSGFHGDVFVCNALIMMYREVGNLASARLLFDKIDNKDVVSWSTMIRNYHRSGFLDEALDLLRDMHIMKVKPNESAMISIIHVFAELGNLKLGKAVHAYVMRNRYYYVKSEASLSTCLIDMHVKCSNLAYARRLFDGLSEASIISWTAMISGYIHFNHLYEGATLFSKMLEEGIFPNEITILSLVKECGNAKALELGKWLHAFTLRNGFTISLVLATAFIDMYGKCDDVISARSVFDSIKNKDLTMWSAMISTYAQKNSIDEAFDAFVQMNGNGIRPNEITIVSLIVLCAKSGSLEMGRWIHSYIDKKGIKEDLILKTSLVDMYAKCGDIDMAYRIFNAATKRDISMLNAMVSGFAVHGHGNAALKLLGKTESLGLIPNDITFISALHACSHAGLVQQGKMVFHKMVHDFGLVPKVEHFGCMVDLLGRAGLLDEAKELIKDMPIRPNVAVLGSFLAACKLHKNVNLGEWVAKQFLSLEPQKYGYNVLMSNIYAEANRWSDVAHIRRGMKDVGISKEAGVSSIEINGSFHDFIMGDRDHPEYQNIYEIID 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0123 674 Gene3D Tetratricopeptide repeat domain 65 237 IPR011990 GO:0005515
Lal14g0123 674 Gene3D Tetratricopeptide repeat domain 443 656 IPR011990 GO:0005515
Lal14g0123 674 PANTHER - 68 322 - -
Lal14g0123 674 PANTHER - 317 649 - -
Lal14g0123 674 PANTHER - 186 424 - -
Lal14g0123 674 PANTHER - 27 213 - -
Lal14g0123 674 Pfam E motif 586 648 IPR046848 -
Lal14g0123 674 TIGRFAM PPR: pentatricopeptide repeat domain 371 404 IPR002885 -
Lal14g0123 674 TIGRFAM PPR: pentatricopeptide repeat domain 269 303 IPR002885 -
Lal14g0123 674 TIGRFAM PPR: pentatricopeptide repeat domain 165 199 IPR002885 -
Lal14g0123 674 Gene3D Tetratricopeptide repeat domain 319 436 IPR011990 GO:0005515
Lal14g0123 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 469 503 IPR002885 -
Lal14g0123 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 269 299 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 443 464 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 544 567 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 472 500 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 165 191 IPR002885 -
Lal14g0123 674 Pfam PPR repeat 69 92 IPR002885 -
Lal14g0123 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 267 301 IPR002885 -
Lal14g0123 674 Pfam PPR repeat family 368 414 IPR002885 -
Lal14g0123 674 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 163 197 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0123 Lal-Chr14 1247365 1249389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0123 67 674 Glycoside Hydrolase AT3G49170 32.846 1.12e-113 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0123 - - gmx:100782031 1002.66