Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0116 ATGGGTAGCGAAGAAGAAGAAGAAGTGTTGGGTGAAGTAGAAGCCATGGAAGCTGTTTATGGAATGGATTTTGTTCTTCTTCGTTCATTCCCTCTTCTTTTTCATCTTTCCCTCTTCCCCCGCACCGCTGATGATTCCTCCCAACAGTTCGTAGAAGCTATTATAGAGATTCGAGCAACCCCTAAGTACCCAAAGGAACCACCTTGTGTTGATGTTGTGGATTGCAAGGGTATGGATGAGATGAGAAGAAAGCATTTATTACATCATATACAAACTAAAGCCCATGAGCTATGCCCCGCTTTCATGCTTGTTGCTCTATGTGAGGAAGCAGTTGAGAAACTCTCAGCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTGCTCCCTTTGGTCCCAATTGATCAGCAGAGCCAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTATCTTCAAAAATCTAAAGAAACAGACTCTGCCAAGTCAAGTAGTGCAACTATGCATCCTAATAAAGGTTATCCTAACAAGATTCTGTTTTATTTATTAGATAATTATAAAAAAGTGGAAGAGGGTATTGGAAACTGCCCGGTGTGTCGCAAACCTTTTCATGTCAAGGATCTGGAACATGTGCTTGACCTAGTTGGTTCACATTCTTCCCAAGTAAATTCAGATAGTGATAAGGCAACTGATGAAGAAGAGCTCCTTCAATCTGAGCATGAAATCATTAGGAGACAGAAATTTGAAGCAGTCTTAAATTTGCAGAAGGAGAACAGTGGTCTGATTGAACCCAAAAGAGATTTGGTAATATTGCCTGGCATGTACCTTCCACAACCAGCCGCAACGCCGAGCTCCACGTCAACCAAGGAATCTGATGAGCAACAAGAAAAAGATATACCTACAGTCATCTCTGAAAAACATGCTGGTGAGACCTCGAATGCGCCTAGTTCTAGCAGGCACAAGAATTTCGGTGCAAGGAGGCAGAGACCAAGAAGTGATAACCACTCTAGTTCGGCCGTAAGAAATCCAAGAAAACCAGTCCAACAACAGTGGGTTAGAAGAGATAATAATCCTGGCAGTAAGCAATAG 1128 0.4167 MGSEEEEEVLGEVEAMEAVYGMDFVLLRSFPLLFHLSLFPRTADDSSQQFVEAIIEIRATPKYPKEPPCVDVVDCKGMDEMRRKHLLHHIQTKAHELCPAFMLVALCEEAVEKLSAMNHPDGDCPLCLLPLVPIDQQSQTLPFMKLMSCFHCFHSECIIRWWNYLQKSKETDSAKSSSATMHPNKGYPNKILFYLLDNYKKVEEGIGNCPVCRKPFHVKDLEHVLDLVGSHSSQVNSDSDKATDEEELLQSEHEIIRRQKFEAVLNLQKENSGLIEPKRDLVILPGMYLPQPAATPSSTSTKESDEQQEKDIPTVISEKHAGETSNAPSSSRHKNFGARRQRPRSDNHSSSAVRNPRKPVQQQWVRRDNNPGSKQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0116 375 SMART ring_2 124 212 IPR001841 -
Lal14g0116 375 SMART RWD2001b 11 117 IPR006575 GO:0005515
Lal14g0116 375 SUPERFAMILY UBC-like 5 114 IPR016135 -
Lal14g0116 375 MobiDBLite consensus disorder prediction 319 334 - -
Lal14g0116 375 Gene3D Ubiquitin Conjugating Enzyme 2 119 IPR016135 -
Lal14g0116 375 MobiDBLite consensus disorder prediction 303 317 - -
Lal14g0116 375 MobiDBLite consensus disorder prediction 348 375 - -
Lal14g0116 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 231 IPR013083 -
Lal14g0116 375 ProSiteProfiles RWD domain profile. 11 117 IPR006575 GO:0005515
Lal14g0116 375 PANTHER RING FINGER PROTEIN 25 4 363 IPR039133 GO:0061630
Lal14g0116 375 MobiDBLite consensus disorder prediction 289 375 - -
Lal14g0116 375 SUPERFAMILY RING/U-box 116 167 - -
Lal14g0116 375 Pfam RWD domain 8 113 IPR006575 GO:0005515
Lal14g0116 375 ProSiteProfiles Zinc finger RING-type profile. 124 213 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0116 K10640 - gmx:100791789 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0116 14 1169312 1173429 Lal14g0116 14 1169312 1173429 ECH