Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0073 ATGTTGCTTTTACTCACATACTCATTCATGTTCTTCTTCACCCTTCTCCTCATATCACCTCTACACATTGTTTCAGATCAAGCATTTGCACAACCAGCCACTAAAATAGCGATAAAAAACCACAACATCCAAAGCTTCATCAATGCTGGCAGAGGCACCAAAATGTTAGGCATAGCACAATTCAAGAGATACTTGACTCGTTTTGGGTATCTCCCCAGGTATAATAACAACAACAACAACAACAAAACTTTCACAGATGAATTTGATGCCAAGTTTGAGGTTGGTCTTATTAGATACCAACAAAGGCTTGGTCTCCAAGTAACTGGGAAACTTGACTCCAACACAGTTTCACAAATGATGATACCAAGATGTGGTGTTCCAGACACAACAACACATAATCATCATCATATTACAAAGCATTTTATGTATTTTCCTGGAAAACCAAGATGGTCACGTCCTATACCAAGGACACTCACCTATGCTTTTTCTCCGGTCAACATGATTCATAGTTTGACCATGCTTGAGATAAGAGAAGCATTCCAACGTGCATTCTTCAACTGGGCTTCGGTTATTCCAGTAAATTTTGTTGAAGCAGAAGACTATGGTTTTGCTGAGATAAAAATAGGGTTTTACATTGGTGAGCATGGTGATGGTGAGCCTTTTGATGGGGTACTTGGTGTGTTGGCACATTCATTTTCACCAGAGAGCGGGCGGCTCCACCTCGATGCGGCGGAGACATGGGCGGTAGACTTTGGAGTAACAAAGTCAAAGGTGGCAGTAGATTTGGAATCAGTGGCCACACATGAAATTGGACATATATTAGGTTTATCTCATAGTTCAGTTAAAGAGGCAGTTATGTATCCAAGTTTGAGGGCAAGAGATAAGAGAGCAAATTTGAACATTGATGACATAAAAGGAGTGCAATCTCTTTATGGATCAAATCCTAATTTCAGGTCTGGGTGGTTACTACAATCTGATTTCTCTGCAAATCAAGCTGCTCAATTTGGAGTTCAACCTTTCATGTTGGCTACTGCTTTCATAATTTTTTCTATCACTCATACTTTATGTGCAAGTTTATCATAG 1083 0.398 MLLLLTYSFMFFFTLLLISPLHIVSDQAFAQPATKIAIKNHNIQSFINAGRGTKMLGIAQFKRYLTRFGYLPRYNNNNNNNKTFTDEFDAKFEVGLIRYQQRLGLQVTGKLDSNTVSQMMIPRCGVPDTTTHNHHHITKHFMYFPGKPRWSRPIPRTLTYAFSPVNMIHSLTMLEIREAFQRAFFNWASVIPVNFVEAEDYGFAEIKIGFYIGEHGDGEPFDGVLGVLAHSFSPESGRLHLDAAETWAVDFGVTKSKVAVDLESVATHEIGHILGLSHSSVKEAVMYPSLRARDKRANLNIDDIKGVQSLYGSNPNFRSGWLLQSDFSANQAAQFGVQPFMLATAFIIFSITHTLCASLS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0073 360 Pfam Matrixin 156 312 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Lal14g0073 360 PANTHER MATRIX METALLOPROTEINASE 11 350 - -
Lal14g0073 360 SUPERFAMILY PGBD-like 53 129 IPR036365 -
Lal14g0073 360 PANTHER METALLOENDOPROTEINASE 4-MMP 11 350 - -
Lal14g0073 360 CDD ZnMc_MMP 149 312 IPR033739 GO:0008237|GO:0008270
Lal14g0073 360 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 143 317 - -
Lal14g0073 360 Pfam Putative peptidoglycan binding domain 59 119 IPR002477 -
Lal14g0073 360 Gene3D Collagenase (Catalytic Domain) 47 317 IPR024079 GO:0008237
Lal14g0073 360 PRINTS Matrixin signature 119 132 IPR021190 GO:0004222|GO:0006508|GO:0008270
Lal14g0073 360 PRINTS Matrixin signature 180 195 IPR021190 GO:0004222|GO:0006508|GO:0008270
Lal14g0073 360 PRINTS Matrixin signature 204 232 IPR021190 GO:0004222|GO:0006508|GO:0008270
Lal14g0073 360 PRINTS Matrixin signature 265 290 IPR021190 GO:0004222|GO:0006508|GO:0008270
Lal14g0073 360 PRINTS Matrixin signature 299 312 IPR021190 GO:0004222|GO:0006508|GO:0008270
Lal14g0073 360 SMART col_5 146 313 IPR006026 GO:0006508|GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0073 Lal-Chr14 893153 894753 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0073 - K07999 gmx:100781237 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0073 14 893153 894753 Lal14g0073 14 893153 894753 ECH